PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy007589
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CO-like
Protein Properties Length: 364aa    MW: 39225.1 Da    PI: 7.2107
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59524594PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box20.97.7e-071555438
   zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
               + C+ ++   + lfC+ ++ +lC  C +++H        H+
  Ahy007589 15 KPCDSCKIASAALFCRPDSAFLCIACDSKIHCAnklasrHD 55
               68******99********************95545555665 PP
2zf-B_box223.4e-075689235
   zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35
               + ++C+ +e+ ++   C+ +   lC +C + +H+
  Ahy007589 56 RVWMCEVCEQAPAAVTCKADAAALCVTCDSDIHS 89
               5789***************************994 PP
3CCT69.77.2e-24289332144
        CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++
  Ahy007589 289 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 332
                9*****************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.9261259IPR000315B-box-type zinc finger
SMARTSM003361.3E-91259IPR000315B-box-type zinc finger
CDDcd000212.84E-61659No hitNo description
PROSITE profilePS501198.7595588IPR000315B-box-type zinc finger
CDDcd000218.09E-75890No hitNo description
SMARTSM003369.2E-460102IPR000315B-box-type zinc finger
PROSITE profilePS5101716.787289331IPR010402CCT domain
PfamPF062035.5E-18289331IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MGLKGLRSGW TVPPKPCDSC KIASAALFCR PDSAFLCIAC DSKIHCANKL ASRHDRVWMC  60
EVCEQAPAAV TCKADAAALC VTCDSDIHSA NPLAAATSAF PSSPSLTLPT LSSRPLPPPS  120
VSFVVPTDNG ISSDGFPNDD AAWLIPNPNY GSKLMDAPDM KSREMFFSEM DPFLDFDYSN  180
SFQNNNNNNS AGNDSVVPVQ SKPAPMMNHH AEGSCFDIDF CRSKLSSFNY PSQSISQSVS  240
SSSLDVGVVP DGNTVSDISY SFGRNCSDSS GMGSAGSGGG ATQLCGMDRE ARVLRYREKR  300
KNRKFEKTIR YASRKAYAET RPRIKGRFAK RTEIESEVDR LYSPGGGVPG CLMLDSQYGV  360
VPSF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015933606.10.0zinc finger protein CONSTANS-LIKE 5
SwissprotQ9FHH81e-107COL5_ARATH; Zinc finger protein CONSTANS-LIKE 5
TrEMBLA0A445AV410.0A0A445AV41_ARAHY; Uncharacterized protein
STRINGXP_007154800.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57660.12e-90CONSTANS-like 5
Publications ? help Back to Top
  1. Vercruyssen L, et al.
    ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development.
    Plant Cell, 2014. 26(1): p. 210-29
    [PMID:24443518]