PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy007537

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

GRAS

Protein Properties

Length: 584aa MW: 63926.1 Da PI: 5.8443

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59522107	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	410.6	1.4e-125	217	572	2	374
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101 +lLl+cAeavs+++le a+++L ++s+l++p g++ qR+aayf eA++arl++s+ ++y++lp + s +++++a+++f+ +sP++kfsh+taNqa Ahy007537 217 LTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPIVPHS----QKVASAFQVFNGISPFVKFSHFTANQA 312 579*************************************************************996....89999****************** PP GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEa 201 I ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g s e+le+tg+rL++fA++lg+pfef va+++ ++++e+L+v++ Ea Ahy007537 313 IQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMEALEATGKRLSDFANKLGLPFEFFG-VAEKVGNVDPERLNVSKAEA 407 ********************************************....***********************.7*************** PP GRAS 202 laVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvace 301 +aV++ h+l+d ++s ++ +L+l+++l Pkv++vveq+++ n++sFl rf+ea++yysalfdsl +++++eseer++vE++ll+rei+nv+a Ahy007537 408 VAVHWLQ--HSLYDVTGSDTN----TLWLLQRLAPKVITVVEQDLS-NTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVG 500 **9..999999999999....***************97.699********************************************** PP GRAS 302 gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 g +r+ + + +++Wre+l+++GF+ ++l +aa+qa+lll +++s+gy++ e++g l lgWkd L+++SaWr Ahy007537 501 GPSRTGEPK-FHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWR 572 998887.*************************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50985	61.419	190	552	IPR005202	Transcription factor GRAS
Pfam	PF03514	4.9E-123	217	572	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence Send to blast
XSQSQRNIRN NSANIVEVVT SSPSSMDESS AASNWIDGIL KDLIHSSNSV SIPQLINNVR 60 EIIYPCNPNL AMLLEYRLRL LTSDSSASAV PAAPPPPPPP QNKTPVMKQT NTSNMHAYGA 120 MHFQDSSLNQ YWPVVPPTPL DSNNNNSVSL ANTLPSPPPP PPPPQPPQQE KPEEDLVTAP 180 ATTTSTATAT EMAVLTRKKT EEMNQQKKKD EEGLHLLTLL LQCAEAVSAE NLEDANKMLL 240 EISQLSTPFG TSAQRVAAYF SEAISARLVS SCLGIYATLP IVPHSQKVAS AFQVFNGISP 300 FVKFSHFTAN QAIQEAFERE ERVHIIDLDI MQGLQWPGLF HILASRPGGP PYVRLTGLGT 360 SMEALEATGK RLSDFANKLG LPFEFFGVAE KVGNVDPERL NVSKAEAVAV HWLQHSLYDV 420 TGSDTNTLWL LQRLAPKVIT VVEQDLSNTG SFLGRFVEAI HYYSALFDSL GSSYGEESEE 480 RHVVEQQLLS REIRNVLAVG GPSRTGEPKF HNWREKLQQC GFRGISLAGN AATQASLLLG 540 MFPSEGYTLV EDNGILKLGW KDLCLLTASA WRPPYTTAMA HHHS

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence Send to blast

XSQSQRNIRN NSANIVEVVT SSPSSMDESS AASNWIDGIL KDLIHSSNSV SIPQLINNVR  60
EIIYPCNPNL AMLLEYRLRL LTSDSSASAV PAAPPPPPPP QNKTPVMKQT NTSNMHAYGA  120
MHFQDSSLNQ YWPVVPPTPL DSNNNNSVSL ANTLPSPPPP PPPPQPPQQE KPEEDLVTAP  180
ATTTSTATAT EMAVLTRKKT EEMNQQKKKD EEGLHLLTLL LQCAEAVSAE NLEDANKMLL  240
EISQLSTPFG TSAQRVAAYF SEAISARLVS SCLGIYATLP IVPHSQKVAS AFQVFNGISP  300
FVKFSHFTAN QAIQEAFERE ERVHIIDLDI MQGLQWPGLF HILASRPGGP PYVRLTGLGT  360
SMEALEATGK RLSDFANKLG LPFEFFGVAE KVGNVDPERL NVSKAEAVAV HWLQHSLYDV  420
TGSDTNTLWL LQRLAPKVIT VVEQDLSNTG SFLGRFVEAI HYYSALFDSL GSSYGEESEE  480
RHVVEQQLLS REIRNVLAVG GPSRTGEPKF HNWREKLQQC GFRGISLAGN AATQASLLLG  540
MFPSEGYTLV EDNGILKLGW KDLCLLTASA WRPPYTTAMA HHHS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5b3g_A	0.0	199	573	3	380	Protein SCARECROW
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Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor involved in asymmetric cell division. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025695914.1	0.0	protein SCARECROW
Swissprot	Q9AVK4	0.0	SCR_PEA; Protein SCARECROW
TrEMBL	A0A445DE66	0.0	A0A445DE66_ARAHY; Uncharacterized protein
STRING	XP_007140014.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54220.1	0.0	GRAS family protein