PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy007477
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 294aa    MW: 31508.1 Da    PI: 6.5152
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59539727PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.22.6e-101155345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      W+ e d+ + +a   ++ +   +W++Ia+ ++ g+t +++k ++ 
        Ahy007477 11 EWSWEQDKAFEEALVTHPDDaldRWEKIAADVP-GKTVEEIKQHYE 55
                     7*****************99*************.**********95 PP
2Myb_DNA-binding422.1e-13118162347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
        Ahy007477 118 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 162
                      6*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129311.166762IPR017884SANT domain
SMARTSM007179.8E-9860IPR001005SANT/Myb domain
SuperFamilySSF466891.0E-101066IPR009057Homeodomain-like
PfamPF002491.6E-81155IPR001005SANT/Myb domain
CDDcd001674.85E-91158No hitNo description
Gene3DG3DSA:1.10.10.604.3E-41155IPR009057Homeodomain-like
PROSITE profilePS5129417.581110167IPR017930Myb domain
SuperFamilySSF466891.22E-16113168IPR009057Homeodomain-like
SMARTSM007173.2E-10115165IPR001005SANT/Myb domain
TIGRFAMsTIGR015572.6E-17115165IPR006447Myb domain, plants
PfamPF002492.7E-11118162IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.4E-10118161IPR009057Homeodomain-like
CDDcd001678.30E-10118163No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MTGDEVDSSS EWSWEQDKAF EEALVTHPDD ALDRWEKIAA DVPGKTVEEI KQHYELLVED  60
VNLIESGCVT LPSYNSSLEG SANHASDEGG GKKGKHDSES NHGTKASRSD QERRKGIAWT  120
EDEHRLFLLG LDKYGKGDWR SISRNFVVTR TPTQVASHAQ KYFIRLNSMN KDRRRSSIHD  180
ITSVNNGEVS APQGPITGQT NGPPPNSAIK SPKQPPPPAS TGVPGVGLYS APTIGQPIAG  240
PLVSAVGTPV NLPPPAHIAY GIRAPVPGGA VVPGAPVNMV PMTYQMPGTS ASHR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A1e-1612881184RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016181553.10.0transcription factor SRM1
RefseqXP_020968725.10.0transcription factor SRM1
RefseqXP_020968726.10.0transcription factor SRM1
RefseqXP_025682557.10.0transcription factor SRM1
RefseqXP_029152247.10.0transcription factor SRM1
SwissprotQ9FNN61e-120SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A444XAJ00.0A0A444XAJ0_ARAHY; Uncharacterized protein
STRINGXP_007153178.11e-177(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-113MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]