PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy006379
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 147aa    MW: 15730.7 Da    PI: 10.719
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58458437PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-9439PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-183366134
       GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
               C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk+
  Ahy006379 33 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKK 66
               ********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577166.65E-132667No hitNo description
PROSITE profilePS5011412.4262763IPR000679Zinc finger, GATA-type
SMARTSM004011.4E-122783IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.109.4E-163167IPR013088Zinc finger, NHR/GATA-type
CDDcd002026.25E-123267No hitNo description
PROSITE patternPS0034403358IPR000679Zinc finger, GATA-type
PfamPF003201.4E-163367IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MVDSTGKGSD SDDASPNSAA AGKSPTTEQK KTCADCGTSK TPLWRGGPAG PKSLCNACGI  60
RSRKKKRAIL GIARGTTTTD DVKKGKRSNT VANSNNNKFG DSFSFKKRWI TMARQRSNPA  120
HTHRNKLGEE EQAAFLLMSL SYGSVYA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015937392.11e-105GATA transcription factor 16
RefseqXP_025610681.11e-105GATA transcription factor 16
SwissprotQ9FJ103e-38GAT16_ARATH; GATA transcription factor 16
TrEMBLA0A445ELY51e-104A0A445ELY5_ARAHY; Uncharacterized protein
STRINGXP_004508168.12e-50(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.13e-38GATA transcription factor 16
Publications ? help Back to Top
  1. Behringer C,Bastakis E,Ranftl QL,Mayer KF,Schwechheimer C
    Functional diversification within the family of B-GATA transcription factors through the leucine-leucine-methionine domain.
    Plant Physiol., 2014. 166(1): p. 293-305
    [PMID:25077795]
  2. Ranftl QL,Bastakis E,Klermund C,Schwechheimer C
    LLM-Domain Containing B-GATA Factors Control Different Aspects of Cytokinin-Regulated Development in Arabidopsis thaliana.
    Plant Physiol., 2016. 170(4): p. 2295-311
    [PMID:26829982]