PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy004704
Common Namedomain, DRE-binding
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 228aa    MW: 24791.6 Da    PI: 6.6916
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58467996PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-5730891PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-194494155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               sgy+GVr +  +g+Wv+eIr+p++   r r++lg++ tae+Aa+a++aa+++++g
  Ahy004704 44 SGYRGVRMRQ-WGKWVSEIREPKK---RNRIWLGTYATAEMAARAHDAAALAIKG 94
               89*****998.**********966...48**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.72E-2144104No hitNo description
PfamPF008471.4E-124494IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-2144102IPR016177DNA-binding domain
SMARTSM003801.7E-3545108IPR001471AP2/ERF domain
PROSITE profilePS5103223.43345102IPR001471AP2/ERF domain
PRINTSPR003674.0E-104657IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-3146103IPR001471AP2/ERF domain
PRINTSPR003674.0E-106884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MDVDPPQKPL VSPIIVNSAA SSSSPDQSSP PPPKPRAKKR AAASGYRGVR MRQWGKWVSE  60
IREPKKRNRI WLGTYATAEM AARAHDAAAL AIKGRAAILN FPELGPHLPR PPTNSPKDIQ  120
AAAAKAAALD YFPSHEAVAN PSRIVSASSS SSSSSSSSHP KDKEESPNSS MDKDDDMFVD  180
LPDLIIDLDH GGRGSEFDYS TRWLVNEADQ LDSAFQLAEP FQWESVPY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-17461021572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025651718.11e-164ethylene-responsive transcription factor ERF039-like
RefseqXP_025698370.11e-164ethylene-responsive transcription factor ERF039-like
SwissprotQ8LBQ71e-45ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A444WUF91e-162A0A444WUF9_ARAHY; Uncharacterized protein
STRINGEOY242819e-53(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-26ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]