PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy004203
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 257aa    MW: 29370 Da    PI: 5.3978
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54165144PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.15.5e-15754148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+      G  +W+++++  g+ R++k+c++rw +yl
        Ahy004203  7 KGPWTAEEDKKLISFLLTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 54
                     79******************************99************97 PP
2Myb_DNA-binding513.3e-1666104747
                      HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       E++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
        Ahy004203  66 YEEKMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 104
                      599*************.*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.23254IPR017930Myb domain
SuperFamilySSF466893.48E-264101IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.2E-19553IPR009057Homeodomain-like
SMARTSM007175.6E-12656IPR001005SANT/Myb domain
PfamPF002493.9E-14754IPR001005SANT/Myb domain
CDDcd001673.80E-8954No hitNo description
Gene3DG3DSA:1.10.10.601.9E-2454110IPR009057Homeodomain-like
PROSITE profilePS5129425.21555109IPR017930Myb domain
SMARTSM007179.9E-1459107IPR001005SANT/Myb domain
PfamPF002497.4E-1466104IPR001005SANT/Myb domain
CDDcd001671.33E-1067105No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
XKVGLKKGPW TAEEDKKLIS FLLTNGQCCW RAVPKLAGLL RCGKSCRLRW TNYLRPDLKR  60
GLLSDYEEKM VIDLHAQLGN RWSKIASHLP GRTDNEIKNH WNTHIKKKLK KMGIDPVTHK  120
PLSNNQQIQE QSNQTPPHNV DFDPNHDELP KTQDQNNPKE EEKPDTIPES KEREEKMVMM  180
MPPPLIDDTI IMDDEIIIIN DINGFCTDEV PIIEPHEILV PSSDPFPSSS SSSSSSSSSF  240
SSSNNFLEDL QLPDFEW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A7e-2851095108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that acts as positive regulator of abscisic acid (ABA) signaling in response to salt stress. Acts as negative regulator ABI1, ABI2 and PP2CA, which are protein phosphatases 2C acting as negative regulator of ABA signaling. Binds to the DNA specific sequence and core element 5'-ACGT-3' found in the promoters of ABI1 and PP2CA to negatively regulate their expression during ABA-dependent salt stress response. {ECO:0000269|PubMed:23660402}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress, drought stress and abscisic acid (ABA). Down-regulated by salicylic acid (SA) methyl jasmonate (JA). {ECO:0000269|PubMed:23660402}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025609421.10.0transcription factor MYB20
SwissprotQ9C7U78e-87MYB20_ARATH; Transcription factor MYB20
TrEMBLA0A445C6960.0A0A445C696_ARAHY; Uncharacterized protein
STRINGGLYMA02G41180.11e-104(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.12e-84myb domain protein 43
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]