PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Ahy002866 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NF-YB | ||||||||||||
Protein Properties | Length: 151aa MW: 16760.8 Da PI: 5.4917 | ||||||||||||
Description | NF-YB family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 44.8 | 3e-14 | 12 | 106 | 6 | 95 |
NF-YB 6 rflPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 ++lP + v ri+k + +++ is kda e + fi ++++ a+d c++ kr+ +n+dd++ al + f +++ plk+ l+ +r+ ++ Ahy002866 12 EELPRTIVRRIVKDKISrcsEDGDISvnKDALLAFSESARIFIHYISATANDICKESKRQIVNADDIFKALEETDFSEFIRPLKASLEDFRKKNA 106 57888999999998875222455554338999999********************************************************8765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.20.10 | 8.5E-32 | 10 | 138 | IPR009072 | Histone-fold |
Pfam | PF00808 | 2.7E-10 | 13 | 82 | IPR003958 | Transcription factor CBF/NF-Y/archaeal histone domain |
SuperFamily | SSF47113 | 2.19E-24 | 14 | 135 | IPR009072 | Histone-fold |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence Send to blast |
MAEEAKAVPE AEELPRTIVR RIVKDKISRC SEDGDISVNK DALLAFSESA RIFIHYISAT 60 ANDICKESKR QIVNADDIFK ALEETDFSEF IRPLKASLED FRKKNAGKKA AVSKEKESEK 120 NKKRKVEGEP SGKVKSDNGE SPEKGDSGDA E |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025683426.1 | 1e-103 | DNA polymerase epsilon subunit 3 | ||||
TrEMBL | A0A445E548 | 1e-101 | A0A445E548_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA11G18960.1 | 7e-69 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 4e-43 | nuclear factor Y, subunit B11 |