PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Ahy002275 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ZF-HD | ||||||||||||
Protein Properties | Length: 201aa MW: 22041.2 Da PI: 7.8422 | ||||||||||||
Description | ZF-HD family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 93.2 | 2.2e-29 | 13 | 66 | 4 | 58 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 Y+eCl+NhAaslG++a+DGCgEf+ + + +g +++l+CaACgCHRnFHR+ ++ Ahy002275 13 SAYRECLRNHAASLGSYATDGCGEFTLD-DISGGSNSLQCAACGCHRNFHRKVNN 66 68*************************8.88899******************876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 3.9E-25 | 14 | 65 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 1.1E-23 | 15 | 63 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 23.605 | 15 | 64 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 9.0E-19 | 15 | 63 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
SuperFamily | SSF46689 | 1.0E-14 | 109 | 181 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.4E-25 | 115 | 182 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01565 | 1.1E-26 | 121 | 181 | IPR006455 | Homeodomain, ZF-HD class |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MEGGVVPSSS SSSAYRECLR NHAASLGSYA TDGCGEFTLD DISGGSNSLQ CAACGCHRNF 60 HRKVNNYPQN GASPSEGTAN TAHELMNYSE ERAIAEEGIE RGIIMGTNNN NININSSSNN 120 KKRFRAKFSE EQKEKMLGFA EKIGWKLQRI SKETEDEVER FCRSVGVSRQ VFKVWMHNHK 180 NNSSFNSSNS ASNGNASALT Q |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wh7_A | 3e-19 | 122 | 182 | 18 | 75 | ZF-HD homeobox family protein |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015966795.1 | 1e-146 | zinc-finger homeodomain protein 10 | ||||
Refseq | XP_025701399.1 | 1e-146 | zinc-finger homeodomain protein 10 | ||||
TrEMBL | A0A445D149 | 1e-145 | A0A445D149_ARAHY; Uncharacterized protein | ||||
STRING | XP_004137520.1 | 2e-71 | (Cucumis sativus) | ||||
STRING | XP_004174113.1 | 2e-71 | (Cucumis sativus) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18350.1 | 4e-39 | homeobox protein 24 |