PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Ahy002249 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ERF | ||||||||||||
Protein Properties | Length: 202aa MW: 22862.7 Da PI: 5.4118 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.1 | 3.4e-16 | 123 | 173 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GV +++ +g+++AeIrdp k r++lg+f+++ +Aaka++ a+ +++g Ahy002249 123 HYRGVKRRP-WGKFAAEIRDP---ArKGSRVWLGTFDSEIDAAKAYDFAAFRMRG 173 7********.**********8...4445**********99*************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 5.6E-30 | 122 | 182 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.63E-28 | 123 | 181 | No hit | No description |
PROSITE profile | PS51032 | 23.894 | 123 | 181 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 6.1E-11 | 123 | 173 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.09E-21 | 123 | 183 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 4.6E-34 | 123 | 187 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.6E-12 | 124 | 135 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.6E-12 | 163 | 183 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MTASQEISSL ELLRQHLLGD NKNNALDSYF TSTTNLIPLV KIEELEHPLE SPKLDYHQFL 60 DLDSYLFEQS GSSFDAKEVA ADQNNVIIAQ SPTEEEIIKN SDTSVEPTML ESVGEKVEAT 120 FRHYRGVKRR PWGKFAAEIR DPARKGSRVW LGTFDSEIDA AKAYDFAAFR MRGQRAILNF 180 PLEAGESEPK PNVCGRKKRR VV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-29 | 119 | 188 | 1 | 70 | ATERF1 |
3gcc_A | 1e-29 | 119 | 188 | 1 | 70 | ATERF1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 124 | 129 | RGVKRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025619855.1 | 1e-147 | ethylene-responsive transcription factor ERF106 | ||||
TrEMBL | A0A444XRT6 | 1e-142 | A0A444XRT6_ARAHY; Uncharacterized protein | ||||
STRING | XP_004496086.1 | 6e-57 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 9e-40 | ERF family protein |