PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Ahy001917 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | GATA | ||||||||||||
Protein Properties | Length: 226aa MW: 25279.6 Da PI: 7.9029 | ||||||||||||
Description | GATA family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.2 | 1.9e-17 | 156 | 190 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C + Tp+WR gp g+ktLCnaCG++y++ +l Ahy001917 156 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 190 *******************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00401 | 6.4E-15 | 150 | 204 | IPR000679 | Zinc finger, GATA-type |
SuperFamily | SSF57716 | 5.23E-15 | 151 | 214 | No hit | No description |
PROSITE profile | PS50114 | 11.108 | 154 | 186 | IPR000679 | Zinc finger, GATA-type |
Gene3D | G3DSA:3.30.50.10 | 9.3E-14 | 154 | 188 | IPR013088 | Zinc finger, NHR/GATA-type |
CDD | cd00202 | 3.81E-12 | 155 | 202 | No hit | No description |
Pfam | PF00320 | 3.9E-15 | 156 | 190 | IPR000679 | Zinc finger, GATA-type |
PROSITE pattern | PS00344 | 0 | 156 | 181 | IPR000679 | Zinc finger, GATA-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
XQQEPFFNRT TEAKQQQXIP HYKTFQSLVR LEAKERGSQQ LPTDEEPKLL SAFGHTKXDE 60 PLISDPPLLK QTYWLADSEL FVLPKRQKKD SGKDVIAKDG DDDDKDGGGE KGAVVMKRGS 120 LVSLEECSEA EEDGDGGNNN NNNNNNNGEN PMPRRCTHCL AQRTPQWRAG PLGPKTLCNA 180 CGVRYKSGRL LPEYRPAKSP TFVSYLHSNS HKKVMEMRMA GSVLHS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016162144.1 | 1e-123 | GATA transcription factor 2 | ||||
Refseq | XP_025658482.1 | 1e-123 | GATA transcription factor 2 | ||||
TrEMBL | A0A444YRJ5 | 1e-121 | A0A444YRJ5_ARAHY; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60530.1 | 7e-36 | GATA transcription factor 4 |