PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ahy001852 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 26332.5 Da PI: 4.8161 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.2 | 3.5e-09 | 180 | 205 | 6 | 30 |
HHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 6 nerErrRRdriNsafeeLrellPk.a 30 ++ErrRR+r+N+++++Lr+++Pk + Ahy001852 180 LMAERRRRKRLNDRLSTLRSIVPKiS 205 589********************944 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 5.23E-7 | 172 | 205 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.185 | 174 | 231 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.2E-6 | 180 | 205 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.1E-7 | 181 | 204 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence Send to blast |
MELSQLGFLE ELMLAPRKDT WTSSTSNDVF SPSSWNYFDP FLDTPSSSSF PPSAFSPPPP 60 DQRFIIDCPF TTSYPFPDDA FTMPDLDSSY TTKYEYDDAP PPPLPHNHQD VDDDNDNNNN 120 NNNPSVLEDE DAGYLGCKVE EQAVVDVQVH VPVVFNMGMC GIGEKKNKSK KLEGQPSKNL 180 MAERRRRKRL NDRLSTLRSI VPKISKVIPF PPTQKVHFFF NLRLYHAMCL Y |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 182 | 189 | ERRRRKRL |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016190307.1 | 1e-150 | transcription factor bHLH61 | ||||
Refseq | XP_025638681.1 | 1e-150 | transcription factor bHLH61 | ||||
TrEMBL | A0A444ZVT8 | 1e-149 | A0A444ZVT8_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA01G02390.1 | 2e-43 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G65640.2 | 2e-16 | beta HLH protein 93 |