PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy001500

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Protein Properties

Length: 260aa MW: 30130.3 Da PI: 10.2651

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-171a-Arachis_hypogaea-22284	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.4	2e-16	8	100	1	100
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100 ffk+ s +l++g+l lpk+f +++g + +k + l+ ++g +W+v + ++ +v+++GWkeFvk ++ g ++ F+++g+s+ v++++ks Ahy001500 8 FFKII-ISQSLQQGILKLPKNFSRKYGAS--LPKPVFLKPPNGTEWKVDW--TMHDADVVFENGWKEFVKYYSINHGYVLKFEYNGNSKL--GVQICDKS 100 56655.678888999*********977..6677***********..******************************997666..89999985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101936	1.02E-20	3	101	IPR015300	DNA-binding pseudobarrel domain
Gene3D	G3DSA:2.40.330.10	2.9E-20	3	100	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	2.34E-15	7	98	No hit	No description
PROSITE profile	PS50863	13.155	7	100	IPR003340	B3 DNA binding domain
Pfam	PF02362	9.9E-14	8	99	IPR003340	B3 DNA binding domain
SMART	SM01019	1.1E-13	8	100	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence Send to blast
MTSKPVLFFK IIISQSLQQG ILKLPKNFSR KYGASLPKPV FLKPPNGTEW KVDWTMHDAD 60 VVFENGWKEF VKYYSINHGY VLKFEYNGNS KLGVQICDKS GLEIEYPVNV NQQEKVNIIE 120 ISDEEVQAFD EMPQRQNNRR KSPKSQLNQR NGNQSQGTSF LKSTSTSIEK ELDGDRKETQ 180 TTSKVKSPLA ETSGTLKEAE KFTSKNPFFI INVTKKFLDQ SRPNVPIDFV KKYLKQRQFA 240 MVRFRDKLWP LKLLPYVTKX

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016179825.1	0.0	B3 domain-containing transcription factor VRN1-like
Refseq	XP_016179826.1	0.0	B3 domain-containing transcription factor VRN1-like
Refseq	XP_016179827.1	0.0	B3 domain-containing transcription factor VRN1-like
Refseq	XP_020969264.1	0.0	B3 domain-containing transcription factor VRN1-like
TrEMBL	A0A444XAP4	0.0	A0A444XAP4_ARAHY; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	7e-14	B3 family protein