PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy001196

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

C2H2

Protein Properties

Length: 286aa MW: 31422.1 Da PI: 7.6689

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-171a-Arachis_hypogaea-6393	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	3	25	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ Ahy001196 3 WKCDKCSKKYAVQSDWKAHSKTC 25 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence Send to blast
KKWKCDKCSK KYAVQSDWKA HSKTCGTREY RCDCGTLFSR LVNXTXLTNR FFDFGXLDEL 60 NFRRDSFITH RAFCDALAEE SARAVTAVSQ SQSREIHGFP LKQEQQSSFS TMPPWLDFSS 120 VTPRLDLDEQ VPNRNPNPSG VIGPTAHMSA TALLQKAAQM GATTTTTTVS SSAQHSQSQL 180 IRTHPQGHVS DTFGLNLSSR DDPTAFAHHG FFPPPASSPS LLHHVINSFD DAFGANDGGG 240 EGLTRDFLGL RPLSHSDILT IAGISNCINS TSSSSPHHHH QKPWQG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5b3h_C	7e-30	1	83	5	64	Zinc finger protein JACKDAW
5b3h_F	7e-30	1	83	5	64	Zinc finger protein JACKDAW
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015935414.2	1e-165	LOW QUALITY PROTEIN: protein indeterminate-domain 11
TrEMBL	A0A445BV15	1e-164	A0A445BV15_ARAHY; Uncharacterized protein
STRING	GLYMA08G20520.2	1e-71	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	3e-26	indeterminate(ID)-domain 7