PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AHYPO_021134-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 62aa MW: 6958.32 Da PI: 9.7531 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 27.9 | 4.7e-09 | 12 | 30 | 2 | 20 |
--SS-EEEEEEE--TT-SS CS WRKY 2 dDgynWrKYGqKevkgsef 20 D++nWrKYG+K++kgs++ AHYPO_021134-RA 12 TDKWNWRKYGKKVIKGSKM 30 7****************85 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.0E-7 | 3 | 30 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 8.696 | 6 | 28 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.26E-6 | 7 | 30 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.7E-5 | 13 | 29 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 62 aa Download sequence Send to blast |
MVQQAYGDRI LTDKWNWRKY GKKVIKGSKM LMLGLLLWFW SLLTVLDASD PLAAVLEAAT 60 C* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Link Out ? help Back to Top | |
---|---|
Phytozome | AHYPO_021134-RA |