PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AHYPO_016830-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Family | G2-like | ||||||||
Protein Properties | Length: 130aa MW: 13363.9 Da PI: 9.2393 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 21.3 | 6.1e-07 | 1 | 19 | 35 | 53 |
G2-like 35 lmkvkgLtlehvkSHLQkY 53 +m+ + Lt+++vkSHLQkY AHYPO_016830-RA 1 MMNPPPLTNDEVKSHLQKY 19 699999************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 6.7E-5 | 1 | 19 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence Send to blast |
MMNPPPLTND EVKSHLQKYP PPTRRPSSTV PNNTNPPPPQ FVVVGGIWVP PPPPPAGGTT 60 ATITTPSNPP PPIATMATPP TTMHPSSAHK PSSHSISEER AASHSDGGVH SNSPATSPPP 120 HTTTASHSH* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021754557.1 | 9e-32 | transcription factor HHO3-like | ||||
TrEMBL | A0A0J8B7X9 | 2e-29 | A0A0J8B7X9_BETVU; Uncharacterized protein | ||||
STRING | XP_010695844.1 | 3e-30 | (Beta vulgaris) |
Link Out ? help Back to Top | |
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Phytozome | AHYPO_016830-RA |