PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_014626-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family G2-like
Protein Properties Length: 371aa    MW: 42864.5 Da    PI: 8.6606
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_014626-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.61.2e-322982255
          G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     prlrWtp+LH++Fv+a+e+LGG++kAtPk +l+lm+v gLt++hvkSHLQ+YR+
  AHYPO_014626-RA 29 PRLRWTPDLHRCFVHAIERLGGQQKATPKLVLQLMDVRGLTISHVKSHLQMYRS 82
                     8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.4812585IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.2E-312583IPR009057Homeodomain-like
SuperFamilySSF466893.05E-152784IPR009057Homeodomain-like
TIGRFAMsTIGR015576.7E-242983IPR006447Myb domain, plants
PfamPF002495.3E-83081IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MESSKNNTNN NNNNNNNNGV RQYVRSKVPR LRWTPDLHRC FVHAIERLGG QQKATPKLVL  60
QLMDVRGLTI SHVKSHLQMY RSMKTDHFSR QGDKGFTQQR KQAFENHDNK NGSTCNYIIE  120
QGKQDVGLHH LSSSNLTNHV FQDQPTFSAA FLPSKRARLE ERKNKVNSSN MMMMRITPNM  180
CMSMSEEEEE EEKMRKNPKK YTSYGLVDDD YKSQKESIYN NNSKGETKIG GIIPFNQNYR  240
QQDQHFEPEN LNIIRCHQQY SLSHHALLPL HPNHSHILPF KKTMAENDQQ TYQNEAQYNY  300
KHQNSHTLFP SGNRTDEFEN ELHQNDVVSA GATQTDDNDE CSLSLSLALQ RQAKSGLLVE  360
RSSNYSSTNV S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-173084458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-173084458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-173084458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-173084458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-173084458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-173084458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-173084458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-173084458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010680052.11e-104PREDICTED: myb family transcription factor PHL11
STRINGXP_010680052.11e-104(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.16e-35G2-like family protein