PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AHYPO_013031-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Family | YABBY | ||||||||
Protein Properties | Length: 119aa MW: 13282.4 Da PI: 10.403 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 25.4 | 4.3e-08 | 4 | 25 | 2 | 23 |
YABBY 2 dvfssseqvCyvqCnfCntila 23 ++ +e++Cyv+CnfCnt+la AHYPO_013031-RA 4 ELAPPPEHLCYVRCNFCNTVLA 25 567889**************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04690 | 2.5E-5 | 8 | 25 | IPR006780 | YABBY protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0007275 | Biological Process | multicellular organism development |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence Send to blast |
MSMELAPPPE HLCYVRCNFC NTVLAGYNFL EKPGGFCNSI DHHITKVQPC SSSSSASTQP 60 DSPRPFVVKR RRYSASKQQI RKLLTGRLLA LPLRIGQGFF RTPQLDHLLG AAKPINQTK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010680651.1 | 7e-21 | PREDICTED: protein CRABS CLAW | ||||
Refseq | XP_010680652.1 | 7e-21 | PREDICTED: protein CRABS CLAW | ||||
STRING | XP_010680651.1 | 3e-20 | (Beta vulgaris) |
Link Out ? help Back to Top | |
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Phytozome | AHYPO_013031-RA |