PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AHYPO_012413-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Family | G2-like | ||||||||
Protein Properties | Length: 260aa MW: 29122 Da PI: 5.9688 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 21 | 7.6e-07 | 81 | 97 | 2 | 18 |
G2-like 2 prlrWtpeLHerFveav 18 prlrWtp+LH +Fv+a+ AHYPO_012413-RA 81 PRLRWTPDLHLCFVHAM 97 8**************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.3E-6 | 77 | 100 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MSNLEGAKTS LSNDEIDDEF EDDKADEEAE EVDDNNNNNS NNSELIKVNG SSSSTSTVDE 60 DDKKKSASSG SVRPYNRSKL PRLRWTPDLH LCFVHAMYRS KKIDELNQAA MSNQGIFTDG 120 RDNIYNLSQL PIYGSDTSYR SHSSQIYAPY NSQASINLFQ GQLSNWRIHQ TLKKATPTSQ 180 PYCSSSSPSP SYQSTSIKPK SNMELNLTIS PILEPLKPSK DHLKRKSIDL DLSLALAPKH 240 ENNYNDQLPT KNTKNKEILG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021732658.1 | 3e-85 | two-component response regulator ARR1-like | ||||
TrEMBL | A0A0K9R1I5 | 1e-70 | A0A0K9R1I5_SPIOL; Uncharacterized protein | ||||
STRING | XP_010693076.1 | 1e-58 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 1e-15 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | AHYPO_012413-RA |