PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_011454-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family G2-like
Protein Properties Length: 485aa    MW: 53196.1 Da    PI: 6.2946
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_011454-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.91.1e-23260304145
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 
                      k r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++h
  AHYPO_011454-RA 260 KSRMRWTPELHEAFVEAVHKLGGSERATPKGVLKLMKVEGLTIYH 304
                      68******************************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.53E-10258304IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-20259304IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-15260303IPR006447Myb domain, plants
PfamPF002493.2E-6262302IPR001005SANT/Myb domain
PfamPF143792.0E-22340386IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0016036Biological Processcellular response to phosphate starvation
GO:0055063Biological Processsulfate ion homeostasis
GO:0071486Biological Processcellular response to high light intensity
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MERNHALSIQ CSGPRQLGAS GALSSSLPVL PSTLEEKYPK LPDSQQVTME RELVNDPLLF  60
HSHPLPSSSK IVGHMLSSSG SSNNVHFSLP THEKHSNSYM TPSASNGSSL PLLQSTHTAL  120
IHSSASDNYT KGNNNFSWCS DLGPGFPDFP SHTTLQNGHI QFNTDGGSNI VTHEEFVKRN  180
DWQEWADQLI ADDEPLSSNW SELLVDTNVV NHETKMSNKL VDSTSNLSLH PMQSQQELSV  240
SSAEVAAVAG SAPGASAPAK SRMRWTPELH EAFVEAVHKL GGSERATPKG VLKLMKVEGL  300
TIYHKYRTAR YRPEPSEGSS SEKSSTPLAD FSSLDLKAGM DLTEALRMQM EVQKRLHAQL  360
EIQRNLQLRI EEQGRCLQKM LEQQAKAGGA PKLKIDSLTS DDPPSEKPQT TGQEKRSECA  420
PSQDQNNGKL TDAPLTPRET TERIGREGKI PNPCDQDLSD QHPTKRSKRS ETKTNLFPET  480
PEDS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-25259312160Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-25259312160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-25259312160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-25259312160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-25259312160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-25259312160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-25259312160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-25259312160Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021848603.10.0protein PHOSPHATE STARVATION RESPONSE 1-like
TrEMBLA0A0K9QTI80.0A0A0K9QTI8_SPIOL; Uncharacterized protein
STRINGXP_010696485.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.16e-71phosphate starvation response 1