PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_008837-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family ERF
Protein Properties Length: 243aa    MW: 27458.7 Da    PI: 5.0403
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_008837-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.36e-2181129355
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++aa+kk++g
  AHYPO_008837-RA  81 YRGIRRRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAAAKKIRG 129
                      9*******.**********954...4*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.31E-2380138IPR016177DNA-binding domain
PROSITE profilePS5103224.84380137IPR001471AP2/ERF domain
CDDcd000184.98E-2180138No hitNo description
Gene3DG3DSA:3.30.730.101.3E-3280138IPR001471AP2/ERF domain
SMARTSM003801.0E-3880143IPR001471AP2/ERF domain
PRINTSPR003677.3E-128192IPR001471AP2/ERF domain
PfamPF008479.1E-1581129IPR001471AP2/ERF domain
PRINTSPR003677.3E-12103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008219Biological Processcell death
GO:0009723Biological Processresponse to ethylene
GO:0009735Biological Processresponse to cytokinin
GO:0009753Biological Processresponse to jasmonic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051707Biological Processresponse to other organism
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MCGGAIISDL IAGNHGRRRN LTTQDLWSQL DVDLLTSSNF SPKPYSPSQF GLPIDGVKTS  60
NNPVEEVPKP IPNRRTRKNI YRGIRRRPWG KWAAEIRDPR KGVRVWLGTF NTAEEAARAY  120
DAAAKKIRGD KAKLNFPEET CPTPPASKRQ CMSNSSESTQ LSYDSVESTQ LPVMNMDNWE  180
DIETVIGMQN EVERQMSELE SILGLSHDSS NKLGESDSVD FCWAMDEFIP MVNYDEHNDN  240
DKF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-23811391574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17387RRTRKNIYRGIRRRP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00109PBMTransfer from AT3G16770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010667125.17e-85PREDICTED: ethylene-responsive transcription factor RAP2-3
TrEMBLA0A0J8B3N92e-83A0A0J8B3N9_BETVU; Uncharacterized protein
STRINGXP_010667125.13e-84(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.14e-45ethylene-responsive element binding protein