PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AHYPO_008141-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Family | G2-like | ||||||||
Protein Properties | Length: 64aa MW: 6845.75 Da PI: 7.7849 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 41.8 | 2.3e-13 | 35 | 59 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWtp LHerFv+av++LGG++ AHYPO_008141-RA 35 KPRLRWTPHLHERFVDAVTKLGGPD 59 79*********************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.4E-11 | 32 | 59 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.1E-8 | 35 | 59 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 64 aa Download sequence Send to blast |
MERSGMGGVY GGGDGGAFSY HQALEGGVLM SRDPKPRLRW TPHLHERFVD AVTKLGGPDT 60 LYL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021725593.1 | 3e-20 | myb family transcription factor PHL11-like | ||||
Refseq | XP_021767850.1 | 3e-20 | myb family transcription factor PHL11-like | ||||
TrEMBL | M5WAB6 | 8e-16 | M5WAB6_PRUPE; Uncharacterized protein | ||||
STRING | XP_010677471.1 | 3e-17 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13640.1 | 2e-14 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | AHYPO_008141-RA |