PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_004471-RA
Organism
Amaranthus hypochondriacus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bZIP
Protein Properties Length: 330aa    MW: 38574.6 Da    PI: 6.3316
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_004471-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.62.3e-07284327448
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      lk+er k++NR++A +  ++ ka+i  Le  vke  aeNk  +k+
  AHYPO_004471-RA 284 LKKERQKIRNRISAAAAYKKEKAYIVYLEGQVKEYRAENK-IRKN 327
                      8**************************************6.5554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579595.51E-5284326No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-5285323No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MELQHRQHHL LHDFEEFERE FLPPYDPQNE AHLRLENDII RPSWLEEMER AFVRDQLKFP  60
SVLDPSTPKK LKITSEFPNQ LNQNNDTDHS VILGSLDSNS VVPNDPKIAY LSETSPSPRM  120
LEELINNLAN QENDTNGLTN IESRPSNVLT RSHTEYTYPT NEENIIDLMN LEDLAEFDFS  180
VLDLIDFDIP TDPNLDIDNR TYINKATNQY GEEFAKKVEN NLWIFREAMK RTSRCCNGGE  240
RVEKGICCNG KCWRHIESKL KALQKIPRGR KKKGFELTPQ ELVLKKERQK IRNRISAAAA  300
YKKEKAYIVY LEGQVKEYRA ENKIRKNLIK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-