PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AHYPO_003454-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Family | NAC | ||||||||
Protein Properties | Length: 188aa MW: 22026.3 Da PI: 5.927 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 51.3 | 3.8e-16 | 12 | 94 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWk.atgkdkevlsk......kgelvglkktLvfykgrapkge.ktdWvmheyrl 128 + +e y F+k+++ky+++++ +rat+sgyW g++k+++ + +g+kkt vf+ gr+p+ + t+W+mhey+l AHYPO_003454-RA 12 SMEEKYVFTKKETKYKNKSQYKRATRSGYWDiINGSEKHMFPPpntnlgRMIMKGIKKTWVFHFGRSPNNQhPTHWFMHEYSL 94 55689*************************966788888888776555555559*********9988876637********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 21.901 | 1 | 119 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.22E-19 | 14 | 119 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.5E-9 | 16 | 94 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MHDSFMHVIG DSMEEKYVFT KKETKYKNKS QYKRATRSGY WDIINGSEKH MFPPPNTNLG 60 RMIMKGIKKT WVFHFGRSPN NQHPTHWFMH EYSLALDVNH NYDSNYKIED WVVCHIFFNQ 120 RMEEEDEAIV LDDGHENYNL RTTSCMFNDM VLFNHSSTCS SSSSSSSNSI IEDSSNDLQS 180 DEESNYF* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021846193.1 | 5e-42 | NAC domain-containing protein 83 | ||||
TrEMBL | A0A0K9R1H0 | 1e-40 | A0A0K9R1H0_SPIOL; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 5e-17 | NAC domain containing protein 32 |
Link Out ? help Back to Top | |
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Phytozome | AHYPO_003454-RA |