PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_002014-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family G2-like
Protein Properties Length: 299aa    MW: 33575.8 Da    PI: 6.3207
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_002014-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1084.9e-341367155
          G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  AHYPO_002014-RA 13 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 67
                     79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.6881070IPR017930Myb domain
SuperFamilySSF466896.27E-181167IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-321168IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-251368IPR006447Myb domain, plants
PfamPF002491.1E-91566IPR001005SANT/Myb domain
PfamPF143797.5E-2299147IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MDPVSNNPNL SSKQRLRWTH ELHERFVDAV AQLGGPDRAT PKGVLRVMGV QGLTIYHVKS  60
HLQKYRLAKY LPDSSCEGKK TDWKESADLF YGPENSSGME ITEALKLQME VQKRLHEQLE  120
ACVQRQLQLR IEAQGKYLKK IIDEQQRLSK TIVEVPGSGD SKSGLLMSDK YLGPDSLKSD  180
PETPPPISES PLGKNNKEYA VAKTLSLDES FSSQHEPLTP DSTCHDAMTS ENYIEERSAK  240
KPCMTNNDAF SSQEILFTQQ ILESSTSQSL QQRHTLYMGE PFYPSALSLG KETREEKL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-231370259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-231370259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-231370259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-231370259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-231370259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-231370259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-231370259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-231370259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019106686.11e-159PREDICTED: myb family transcription factor PHL7 isoform X1
SwissprotQ9SJW01e-108PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A0K9R9S31e-125A0A0K9R9S3_SPIOL; Uncharacterized protein
STRINGXP_010686602.11e-158(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-110G2-like family protein