PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_000143-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family G2-like
Protein Properties Length: 425aa    MW: 47117.5 Da    PI: 6.2613
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_000143-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.45.6e-32250304155
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      k+r+rWt++LHe+Fve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR+
  AHYPO_000143-RA 250 KTRIRWTTDLHEKFVECVNRLGGADKATPKAILKLMNADGLTIFHVKSHLQKYRI 304
                      68****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.393247307IPR017930Myb domain
SuperFamilySSF466891.47E-17248304IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.8E-29248305IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-23250305IPR006447Myb domain, plants
PfamPF002493.9E-9254303IPR001005SANT/Myb domain
PfamPF143791.1E-19334381IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MSNQKIDFRE QVQESNGVIS DCMVELGSKD SQFMSIREPW NMGNCMGGGV DSLQPQNVLP  60
VNLSTTIASR FCPPVPGFSA PERYAGLPYD QQINNATFSS RCSRNYDLDY RSYPCSTEGF  120
SADLAEPEGS DLQSRSTVQA AAKSLLYGDQ TQFYAPVKTF GGPCSNYSGS DHIQQLKNKL  180
FVDFANSDGR NYLFPINEKQ DLSILDKSYD SPHCQLSFSC QGDKQGLNPL GVVPLNSGNS  240
FSSGASVSSK TRIRWTTDLH EKFVECVNRL GGADKATPKA ILKLMNADGL TIFHVKSHLQ  300
KYRIAKYMPN SNEGKSDRSS SLNDVTQLDA KAGIQLKEAL QLQLDVQRRL HEQLEIQRNL  360
QRRIEEQGRQ LKMMFDQQQK TRQTLLGDQS SDNMSPNGPS FSLDEVQLSS EEGSGCNNFQ  420
SKIS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-23250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-23250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-23250307158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-23250307158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-23250307158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-23250307158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-23250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-23250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-23250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-23250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-23250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-23250307259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021723996.10.0myb family transcription factor PHL5-like
TrEMBLA0A0K9RV660.0A0A0K9RV66_SPIOL; Uncharacterized protein
STRINGXP_010672678.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.18e-73G2-like family protein