PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araha.6174s0024.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | bZIP | ||||||||
Protein Properties | Length: 451aa MW: 48808.5 Da PI: 10.2315 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.7 | 2.5e-13 | 372 | 424 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe ++++L++ N++L+k+ e+ ++ + Araha.6174s0024.4.p 372 RRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKTNQELQKKQAEMVEMQK 424 69***************************************976555544433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.1000.10 | 9.5E-4 | 238 | 278 | No hit | No description |
SMART | SM00338 | 3.9E-11 | 368 | 429 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.726 | 370 | 419 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 4.80E-23 | 372 | 419 | No hit | No description |
SuperFamily | SSF57959 | 5.7E-10 | 372 | 421 | No hit | No description |
Pfam | PF00170 | 7.3E-11 | 372 | 425 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.6E-13 | 372 | 421 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 375 | 390 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:1900057 | Biological Process | positive regulation of leaf senescence | ||||
GO:1903648 | Biological Process | positive regulation of chlorophyll catabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 451 aa Download sequence Send to blast |
MGTHINFNNL GGGGHPGGEG SSNQMKPTGS VVMPLARQSS VYSLTFDELQ NTLGGPGKDF 60 GSMNMDELLK SIWTAEEAQG MAMTSSSAAT AAAQPCAGIP GGNLQRQGSL TLPRTISQKT 120 VDEVWKCLIT KDGNMGSSSG GGGESNALPG RQQTLGEMTL EEFLFRAGVV REDNCAQQMG 180 QVNGNNNNGF YGNGNAAGGL GFGFGQPNQD SISFNGNNDS MIMNQPSGLG LKVGGTMQQQ 240 QQQPQQQQQL LQQQQKQQQL LQQQQQQQQL QQLNQPHQHQ HPQQRLPQII FPKQANVAFS 300 SPVNIVNKGF AGAANNSINN NNGLANFGGT GVTVAATSPG TSSAENNSLS PVPYVLNRGR 360 RSNTGLEKVI ERRQRRMIKN RESAARSRAR KQAYTLELEA EIEKLKKTNQ ELQKKQAEMV 420 EMQKNELKES SKRPWGSKRQ CLRRTLTGPW * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16463099}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araha.6174s0024.4.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA) and cold. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AB017161 | 0.0 | AB017161.1 Arabidopsis thaliana mRNA for ABA-responsive element binding protein 2 (AREB2), complete cds. | |||
GenBank | AB025624 | 0.0 | AB025624.1 Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLD14. | |||
GenBank | AF093547 | 0.0 | AF093547.1 Arabidopsis thaliana clone 19 abscisic acid responsive elements-binding factor (ABRE) mRNA, partial cds. | |||
GenBank | AY050897 | 0.0 | AY050897.1 Arabidopsis thaliana putative abscisic acid responsive elements-binding factor (At3g19290) mRNA, complete cds. | |||
GenBank | AY091298 | 0.0 | AY091298.1 Arabidopsis thaliana putative abscisic acid responsive elements-binding factor (At3g19290) mRNA, complete cds. | |||
GenBank | CP002686 | 0.0 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020887153.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 7 isoform X2 | ||||
Swissprot | Q9M7Q2 | 0.0 | AI5L7_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
TrEMBL | D7L9X6 | 0.0 | D7L9X6_ARALL; Uncharacterized protein | ||||
STRING | fgenesh2_kg.3__2145__AT3G19290.1 | 0.0 | (Arabidopsis lyrata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.3 | 2e-92 | ABRE binding factor 4 |
Link Out ? help Back to Top | |
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Phytozome | Araha.6174s0024.4.p |
Publications ? help Back to Top | |||
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