PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ZY44I
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 301aa    MW: 34611.8 Da    PI: 9.2674
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ZY44IgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.21.8e-105633698
                 EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                 ++l+ ++g +W++    ++++g+++++kGWkeF+    L+ g ++ F+++g+s+   +v +f+
  Aradu.ZY44I  5 VQLQPPDGTEWRIDW--TNRDGEILFEKGWKEFATFYTLENGHVLWFEYNGTSNI--KVNIFD 63
                 789999*********..*******************************9986555..888886 PP
2B333.57.7e-111962641789
                  E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
           B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                   lp  f++ + ++++   +  +     ++W  +liy  ++++ +++  W+ F ++n+Lk+gD+++F+l++r++
  Aradu.ZY44I 196 NLPVCFFRMYFENTK---QYAILRVGKKQWHATLIYYPYRKTALIS-SWRLFLEENNLKAGDVCIFELINRQR 264
                  577777777755533...356667788*********9999887666.********************998644 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.153165IPR003340B3 DNA binding domain
CDDcd100171.13E-6263No hitNo description
Gene3DG3DSA:2.40.330.106.2E-13374IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.06E-12372IPR015300DNA-binding pseudobarrel domain
PfamPF023627.1E-8563IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.5E-16173269IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.87E-14174264IPR015300DNA-binding pseudobarrel domain
SMARTSM010192.3E-4181273IPR003340B3 DNA binding domain
PfamPF023629.4E-8197264IPR003340B3 DNA binding domain
CDDcd100171.45E-9197262No hitNo description
PROSITE profilePS508638.924220275IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MPNPVQLQPP DGTEWRIDWT NRDGEILFEK GWKEFATFYT LENGHVLWFE YNGTSNIKVN  60
IFDMSALEID YPSNGRIGDD NSVEILDEPP PRRGRGRPKK KVIAEPKQSC ASTSKIMKSA  120
IKTKDIDKNP NTQNLKLHVE NEKDGQSEET ADLKLPIVQR AIPDMDVIRE AKKFKSKNPS  180
FAIKIKQMHQ TGSPANLPVC FFRMYFENTK QYAILRVGKK QWHATLIYYP YRKTALISSW  240
RLFLEENNLK AGDVCIFELI NRQRPDLQIN GVCSGIKSCN RVIVFIILNG CIAVLSPYYH  300
N
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.ZY44I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015946665.21e-177B3 domain-containing protein At4g01580-like isoform X1
TrEMBLA0A445B0X91e-173A0A445B0X9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-21B3 family protein