PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ZX977
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 158aa    MW: 18027.2 Da    PI: 8.0706
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ZX977genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1522.4e-1651135189
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                  kfY++YAk++GFs+r+++++++   +ei+++  +Cs+egk +++ +    +++t+++   +  a++ ++  k  g w ++k++l+H+H++
  Aradu.ZX977  51 KFYKNYAKTAGFSTRVRSTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAVLNYPARIYIHTLKdVGAWIISKVVLNHSHPC 135
                  6****************98887..8889*************999877...888999999999******988879**************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.9E-1451136IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MDDSTSDCQL NQGEVDYEFE SNEVSEPLSV VDDQFVSKVG MTFTTLEDAG KFYKNYAKTA  60
GFSTRVRSTN RKGNEIKNQL ITCSREGKWK SKISPTEKTN PTAVLNYPAR IYIHTLKDVG  120
AWIISKVVLN HSHPCYPSKS EMLKQHRELN IHSSYNRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.ZX977
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-166HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997160.16e-94protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YSY63e-97A0A444YSY6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-10FAR1 family protein