PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.YY1QV
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 438aa    MW: 48293.9 Da    PI: 8.579
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.YY1QVgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.82.7e-39129188261
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                  +ek+l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+ 
  Aradu.YY1QV 129 PEKILQCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHL 188
                  7899******************************************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-28120186IPR003851Zinc finger, Dof-type
PfamPF027015.7E-32131187IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.435133187IPR003851Zinc finger, Dof-type
PROSITE patternPS013610135171IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
KNFTLCKFAS QKHHHSSNIK HNYKRLMSGA GNMSDNKDPG IMLFGMKIPL PEFQIPASSQ  60
MGCQIQANFA AMNSCSNLKK TEVETQSAQN SEQEKNTCGS SYSKQESKNT EEGNEESSNT  120
DQERSFKKPE KILQCPRCNS LETKFCYFNN YNVNQPRHFC KNCQRYWTAG GTMRNVPVGA  180
GRRKNKHLAS QFRHIIVSEG TPAARLEPRE DSSGNNGSVL KFGPDVPLCE SMESMLSLRD  240
QKPNVDAASS ANSYFQNESL EQKCYSIPQF SWNPGWNNGG SPVPLTFPAT MRGVPTISPP  300
NIPLQFVPGS FWNRTQVWPS QTAAVSIGSN GCLSPSSSTT SNSCCSGNGS PTLGKHTRDS  360
NVFIDDEKSE ICVLVPKTLR IDGPNEASRK HLYESENGVS KKVEQKGQGK ERVLGVSQIL  420
EANPAAVSRV HAFQESTQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.YY1QV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015946926.10.0cyclic dof factor 3
TrEMBLA0A444X9S10.0A0A444X9S1_ARAHY; Uncharacterized protein
STRINGGLYMA19G29610.21e-145(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF35023165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.28e-60cycling DOF factor 2