PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.Y4HIG | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | GeBP | ||||||||
Protein Properties | Length: 281aa MW: 31533.8 Da PI: 10.1019 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 82.2 | 7.3e-26 | 47 | 143 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkks..isfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 lfqr++seeDei +L+Gl +f aktgk+p++ d+fy+f+k+s i ++vs ql +KirrLKkKf+++ k k+gk + k+h+ ++++l k +Wg Aradu.Y4HIG 47 LFQRVFSEEDEIGILKGLSEFIAKTGKEPYKCADEFYDFMKGSnlIRANVSCMQLKDKIRRLKKKFENNLVKEKNGKG-TTLKPHELEALQLGKNVWG 143 79**************************************9755599*************************888887.6789**************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 4.5E-24 | 48 | 143 | IPR007592 | Protein of unknown function DUF573 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005730 | Cellular Component | nucleolus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0009507 | Cellular Component | chloroplast | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence Send to blast |
MLKSQPSASV SQTKSGSKRA AENGIDHSEQ PKRVKKAQED AQKSKSLFQR VFSEEDEIGI 60 LKGLSEFIAK TGKEPYKCAD EFYDFMKGSN LIRANVSCMQ LKDKIRRLKK KFENNLVKEK 120 NGKGTTLKPH ELEALQLGKN VWGHDGRGGE AVLKETAKKD TVNNEKAAKK ALVPHSKGKA 180 EAKSKLNSEP LDSNEGRRMS EFSVTSLALT SMLRYDGTFG KPFGEDYIRK GIELLGVSKR 240 EDIEARWRKF KDAENRLYVE IAEFYAEQAK LIYQANSSSS S |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.Y4HIG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015931774.1 | 0.0 | probable transcription factor At1g61730 | ||||
TrEMBL | A0A445C6H3 | 0.0 | A0A445C6H3_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1831 | 34 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 4e-23 | DNA-binding storekeeper protein-related transcriptional regulator |