PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Y1APE
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 344aa    MW: 38751.5 Da    PI: 8.1131
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Y1APEgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3331.1e-10250342397
                  EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
           B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                  k l++s   +++ +v+p +fae+   + ++   + +   +g  +++ l++ +kk+ + +l  GWk F+k ng ++  ++ F+   ++e+ l+vk++
  Aradu.Y1APE 250 K-LLTSTQVQNSAVVIPLRFAESAFPNRHN--HVNVILNNGSCYRMGLRWsKKKKVQLYLMHGWKTFAKYNGFRACTVLEFSILPSDETILHVKIL 342
                  4.45666666667********999755445..566666679999999999555555599999*******************976556666888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100172.98E-8245343No hitNo description
Gene3DG3DSA:2.40.330.102.5E-11247343IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.16E-11247341IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.123247344IPR003340B3 DNA binding domain
PfamPF023621.2E-7250341IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MGRNRLIPSD FDNDRIFYLH VDPVAVTHEL PSLFYRKYNH LFRDRLIVID ANDNQIELSL  60
GRCFSTGYII NGFHNLVGVK DSCMTTKEFS CLPSISLIAI KPHGPPNKNE PLETLCYPLA  120
VFPLSVSTCY TPEVQTVYMQ DVIRVNFQRD DGFMSVPSLN ESYVLSDPSH PCIINSNGMS  180
NQGNDFMENQ HQLLDQTLLN CNTLNNYISS ASHPTIQTEK KHAGNNIMSP LISSGPGTAI  240
QGAQPLTCLK LLTSTQVQNS AVVIPLRFAE SAFPNRHNHV NVILNNGSCY RMGLRWSKKK  300
KVQLYLMHGW KTFAKYNGFR ACTVLEFSIL PSDETILHVK ILKI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Y1APE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020989996.11e-151uncharacterized protein LOC110277091
TrEMBLA0A445D3598e-80A0A445D359_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2396823