PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.XJF09
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 396aa    MW: 43554.1 Da    PI: 6.9424
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.XJF09genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.54.1e-30561972128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksg 81 
                  p+G++F+P+d el+ e+L++k+   +      +  +++i++++    i++++P++Lp  +k++  +++fF+k+ ++yatg+rk+r+         ++ 
  Aradu.XJF09  56 PAGVKFDPSDIELL-EHLAAKCCVGNkvphafI--QDFIPTLEgdqgICYTHPENLP-GAKKDGASVHFFHKTTNAYATGQRKRRKinhqlglsEEHV 149
                  89************.777777554443665331..334554423344**********.556778899******************8677777665589 PP

          NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                  +W++tgk+k+v++ +g ++g kk++v+y   +r  k++k++Wvmh+y+l
  Aradu.XJF09 150 RWHKTGKTKAVTE-NGVHKGFKKIMVLYvrPKRGAKPNKSKWVMHQYHL 197
                  9***********9.999***********7645777777*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-3640216IPR003441NAC domain
PROSITE profilePS5100529.37355216IPR003441NAC domain
PfamPF023651.6E-1256197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MARSWVIDIG GLAKKVKNNT LPLADQINDC GAYCECPICH YHIDNIDVSP EWPGFPAGVK  60
FDPSDIELLE HLAAKCCVGN KVPHAFIQDF IPTLEGDQGI CYTHPENLPG AKKDGASVHF  120
FHKTTNAYAT GQRKRRKINH QLGLSEEHVR WHKTGKTKAV TENGVHKGFK KIMVLYVRPK  180
RGAKPNKSKW VMHQYHLGSE EGEKEGEYVV SKIFYQQQKK TKKNKLNPLV AEDSVMALQA  240
SPRTPNPNPP KRPRTGKSVD FEETDLMLFT QGGKPTIHGE SLEPPPSEVH GDENNGGFNN  300
TALLSVETQP VNSDFIGLDD ILLCKEQTLD SSSAHLNDSG LKSNNLKGFA CNANGNAGEL  360
FGDVNDCYGI SVLDNLGLDS PPDFDLSVST RSPLSS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.XJF09
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0980154e-43BT098015.1 Soybean clone JCVI-FLGm-26B21 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020998597.10.0SUPPRESSOR OF GAMMA RESPONSE 1
TrEMBLA0A444YZ930.0A0A444YZ93_ARAHY; Uncharacterized protein
STRINGGLYMA05G09110.21e-169(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.13e-86NAC domain containing protein 44