PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.W1QP0
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 572aa    MW: 63113.7 Da    PI: 6.2445
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.W1QP0genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA37.72.8e-123664735
         GATA  7 tkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                 t TplWR+gp  ++ LCnaCG ++r kg+
  Aradu.W1QP0 36 TGTPLWRNGPPEKPVLCNACGSRWRTKGT 64
                 88********88888***********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004010.00151476IPR000679Zinc finger, GATA-type
SuperFamilySSF577169.03E-63568No hitNo description
Gene3DG3DSA:3.30.50.101.4E-83664IPR013088Zinc finger, NHR/GATA-type
PfamPF003205.0E-103664IPR000679Zinc finger, GATA-type
CDDcd002028.79E-113876No hitNo description
PfamPF139192.2E-8319401IPR028020ASX homology domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    Send to blast
KIEIWASKDL AITVELQLKC NHCVLFEYSL QLSIATGTPL WRNGPPEKPV LCNACGSRWR  60
TKGTLANYTP LHARAEADDS EDQRVSRVKI ISLHKNKEMK SLKRKQNHDS VVVSGGLTPD  120
YKYNQGFGKA VDEDTSNRSS SGSAISNTES CAQFGGTDAS DLTGPAQSVV WEAMVPSKKR  180
TCVGRPKASS VEKLTKDLCT ILHEQQSYFS TSSEEELLFE SETPMVSVEI GHGSVLIKHP  240
SYVAREEVSE ASAVSVDNKQ CLVSEAYSDS GPFLVYNDLN GMNFSSYGVD KVENSADQEM  300
QEEQLKRHAF LHNDKSQLER VQILGDHNSP LCSIDLNDVV NYKEFVRNMT NEDQQLLLKF  360
LPMVDTAKLP DSLKVMFNSS QFKENLTYFQ QLLGEGVFDI SFLGAKPEDC KTLKRLALSN  420
LSKSKWVEHY SYLKRCKTTA AKSVSQGSTG KASSNFANAK RLRDGQNQNS PELKTMMRSP  480
KGMTIKIGSE GNEVVEDGSC YSPKSLFALP PDAASLLQVS SNFVEESSDH DVLVEVPSNS  540
SFPQAELLHP TSSFGAQAST SSSSVYSHFV HN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.W1QP0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015963645.10.0GATA transcription factor 26 isoform X1
RefseqXP_025651786.10.0GATA transcription factor 26-like isoform X1
RefseqXP_025698401.10.0GATA transcription factor 26-like isoform X1
SwissprotQ8W4H11e-140GAT26_ARATH; GATA transcription factor 26
TrEMBLA0A444WUI70.0A0A444WUI7_ARAHY; Uncharacterized protein
STRINGGLYMA11G04060.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44243155
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.31e-135GATA transcription factor 26