PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.VV0JI
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family DBB
Protein Properties Length: 546aa    MW: 61012.7 Da    PI: 6.888
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.VV0JIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box18.93.2e-06444539
     zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                  C+ +e+ +++  C  ++  lC++C +e H        H++
  Aradu.VV0JI  4 QCDVCEKAQATVICCADEAALCAKCDVEVHAAnklarkHQR 44
                 7******99*********************65667777765 PP
2zf-B_box29.21.9e-095394237
     zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                 + ++C+ +++k++ +fC +++ l+C+dC + +H+       H
  Aradu.VV0JI 53 KLPRCDICQDKPAFIFCVEDRALFCQDCDEPIHSAgslsanH 94
                 789******************************656666666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.556147IPR000315B-box-type zinc finger
CDDcd000211.24E-7347No hitNo description
SMARTSM003362.5E-9447IPR000315B-box-type zinc finger
PROSITE profilePS501199.0445299IPR000315B-box-type zinc finger
SMARTSM003364.6E-155299IPR000315B-box-type zinc finger
PfamPF006432.2E-85395IPR000315B-box-type zinc finger
CDDcd000213.35E-95598No hitNo description
SuperFamilySSF520581.56E-50238531IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.101.6E-34239349IPR032675Leucine-rich repeat domain, L domain-like
SMARTSM0036928246270IPR003591Leucine-rich repeat, typical subtype
PROSITE profilePS514505.217248271IPR001611Leucine-rich repeat
PfamPF005601.5249270IPR001611Leucine-rich repeat
PfamPF138553.1E-11272330IPR001611Leucine-rich repeat
SMARTSM0036912294317IPR003591Leucine-rich repeat, typical subtype
PROSITE profilePS514507.165296318IPR001611Leucine-rich repeat
SMARTSM0036988318341IPR003591Leucine-rich repeat, typical subtype
PROSITE profilePS514505.456320342IPR001611Leucine-rich repeat
PROSITE profilePS514504.947343362IPR001611Leucine-rich repeat
Gene3DG3DSA:3.80.10.101.5E-27350525IPR032675Leucine-rich repeat domain, L domain-like
PROSITE profilePS514506.056364386IPR001611Leucine-rich repeat
PROSITE profilePS514504.732387409IPR001611Leucine-rich repeat
SMARTSM00369190409432IPR003591Leucine-rich repeat, typical subtype
PROSITE profilePS514504.655411432IPR001611Leucine-rich repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    Send to blast
MKIQCDVCEK AQATVICCAD EAALCAKCDV EVHAANKLAR KHQRLLLQCL SNKLPRCDIC  60
QDKPAFIFCV EDRALFCQDC DEPIHSAGSL SANHQRFLAT GIQVALSSSS NCNKGNEKSH  120
LEPPNRNNAQ QVSMEVPPQQ VPNFSSSSWG VDDLLELSAF ESPEKKESMQ FGELEWIEDV  180
GLFGEQFPHE ALAAAEVPQL TSNNAASFRT TSKSYMSHKK PRIEDDDDEF FTVPDLGFLT  240
PAIGNLTELT VLNLNNNKFR GPLPESLGNL RKLIRITMSS NFFTGTIPQG ITQLKNLEHL  300
DLSRNRLSGK IPEEITGLRS LTYLSLSRNE FAGRTPDLTG LWQLGTLDLS FNQFYGNLPI  360
LPIRLRRLYL SHNIFSGRLT PLKGLMHLKW VDISDNRLSG GITKDIFYLH GVVHLNVSYN  420
RFTMIDPVKY SGDGPMLQVL EAQGNQLKGH LPLNLVTYRN LTSINFANNQ FHGPIPEEYG  480
PMLQGQWRRL LLDLNFLSGK LPLEFRHNNT KVTVGISNNC LVCPTSVAIC RGAQRPVTEC  540
MGEQNL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4mn8_A2e-3019452950740LRR receptor-like serine/threonine-protein kinase FLS2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.VV0JI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025613765.20.0putative receptor-like protein kinase At3g47110
TrEMBLA0A445BVK20.0A0A445BVK2_ARAHY; Uncharacterized protein
STRINGAES677771e-146(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34383157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31380.17e-86salt tolerance homologue