PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.VI57J
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CAMTA
Protein Properties Length: 952aa    MW: 107076 Da    PI: 6.0152
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.VI57JgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1167.42.3e-52281452118
         CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrc 98 
                  ++e k+rwlk+ e++ iL n+++ ++t+ ++++p+sgsl+L+nr+++r+frkDGy+w+kk+dg+tv E+he+LK+g+ve+l+cyYah+een++fqrr+
  Aradu.VI57J  28 YQEaKRRWLKPVEVLYILRNHDQCKFTNIPPQKPTSGSLFLFNRRIMRFFRKDGYNWRKKRDGRTVGEAHERLKIGNVEILNCYYAHGEENRSFQRRS 125
                  567699******************************************************************************************** PP

         CG-1  99 ywlLeeelekivlvhylevk 118
                  yw+L+ ++e+ivlvhy+e+k
  Aradu.VI57J 126 YWILDPAYEHIVLVHYRETK 145
                  *****************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143775.74724150IPR005559CG-1 DNA-binding domain
SMARTSM010761.1E-6827145IPR005559CG-1 DNA-binding domain
PfamPF038592.0E-4630143IPR005559CG-1 DNA-binding domain
CDDcd001020.0024448532No hitNo description
PfamPF018331.5E-7448522IPR002909IPT domain
SuperFamilySSF812961.87E-17448532IPR014756Immunoglobulin E-set
Gene3DG3DSA:2.60.40.105.5E-7448525IPR013783Immunoglobulin-like fold
Gene3DG3DSA:1.25.40.201.2E-15644739IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.167645737IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484036.68E-16649739IPR020683Ankyrin repeat-containing domain
CDDcd002042.63E-13650737No hitNo description
PfamPF127962.4E-8656738IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.179678710IPR002110Ankyrin repeat
SMARTSM002480.048678710IPR002110Ankyrin repeat
SMARTSM00248820717746IPR002110Ankyrin repeat
SuperFamilySSF525401.57E-8783838IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000153.9786808IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.84787816IPR000048IQ motif, EF-hand binding site
PfamPF006120.02789807IPR000048IQ motif, EF-hand binding site
SMARTSM000157.2E-4809831IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.304810834IPR000048IQ motif, EF-hand binding site
PfamPF006125.9E-5812831IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 952 aa     Download sequence    Send to blast
MPPGRKEGVS WNFLHVMAGF EYNIDDLYQE AKRRWLKPVE VLYILRNHDQ CKFTNIPPQK  60
PTSGSLFLFN RRIMRFFRKD GYNWRKKRDG RTVGEAHERL KIGNVEILNC YYAHGEENRS  120
FQRRSYWILD PAYEHIVLVH YRETKEGNSG SGPIPPLSGG SSPEFSQNRS SRTTLDPGTI  180
SVFGDSCEPS QNFSSPESME VTSNIIRNNG MDQLDETDAV LRQLKQQLSL EKENCEEISP  240
TYNEPEILHD LNPQHDERVM YKHKSAAFTV PNDYGQAAYE CNGRQGVICL PLEALSLHSA  300
KFAKDQLQNS TDESDNGKNY NQLLNCDHPD ANENALSWTE VLESCKPASL TNLPEQHAYE  360
AYGNDSSLHS SRGVLIDSQQ NSRWINSNSI NAENSVFSCP QDGGTKFPLY SPVEAESSDY  420
ATLFHQIQIP PPLDADSCLT ISQKQKFTIR RIFPEWCYAT ETSKVVIIGS FLCLPSNSTW  480
ACMFGDIEVP AEIIQDGVIC CEAPPHLPGK VTLCVTSGNR ESCSEFREFE FRNKTNNCTR  540
CNSMETETAR SQDELLLLVT FAQMLLSPPT KKNDNMEPVY HLPVEQKADD DSWSHVIEAL  600
LVGSGTSSGT IDWLLEELLK DRLQLWLSGK SWEIDEATGC PLSKKEQGII HMVAGLGYEW  660
ALIPILSCGV NINFRDIRGW TALHWAARFG REKMVASLIA AGAYAGAVTD PTSADPDGKT  720
AAAIAASNGH KGLAGYLSEV ALTSHLSSLT LWGFTGCYGY DIDADGIGNI LELSPRLSHS  780
FGRLRDYNAA ALSIQKKYRG WKGRKDFLAL RQKVVKIQAH VRGYQVRKQY KIIVWAVGVL  840
EKVVLRWRRK GAGLRGYRQD SIDENDDDDF LKVFRKQKVH VAIEKAFSRV LSMVHSSGAR  900
QQYRRMLEMY REAKAELGSM NDEAPLATSV GDTSNIDDDD ELFQIPGGWE TL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.VI57J
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020995360.10.0LOW QUALITY PROTEIN: calmodulin-binding transcription activator 4-like
TrEMBLA0A445DKP60.0A0A445DKP6_ARAHY; Uncharacterized protein
STRINGGLYMA08G11080.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45482950
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains