PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.V4TBZ | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | B3 | ||||||||
Protein Properties | Length: 122aa MW: 14060.7 Da PI: 9.9112 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.7 | 1.5e-11 | 54 | 102 | 26 | 73 |
T...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT CS B3 26 h...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkang 73 +++++ ++l+ +d +g +W++k+iyr+++++y+l+ GW+ Fv + + Aradu.V4TBZ 54 KdmtMKNPT--QELVAKDIHGVEWKFKYIYRGHPKSYLLSIGWSAFVGQER 102 244444444..48**********************************8766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02362 | 5.9E-9 | 54 | 108 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 2.35E-10 | 54 | 98 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 5.0E-12 | 55 | 102 | IPR015300 | DNA-binding pseudobarrel domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence Send to blast |
MLQFLSMGCS LMRWFLSPPL PYIMISGFSL HLIARTRIEN LVNFVLSAKM KSSKDMTMKN 60 PTQELVAKDI HGVEWKFKYI YRGHPKSYLL SIGWSAFVGQ ERNKVVVQVT LKEVDGVECI 120 VY |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.V4TBZ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A445ERC3 | 2e-44 | A0A445ERC3_ARAHY; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46530.2 | 2e-18 | auxin response factor 11 |