PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.ULI7Q

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 346aa MW: 38689.1 Da PI: 5.8964

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.ULI7Q	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.1	6.5e-09	87	159	1	73
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekd 73 +fY +Y k F rk+ + + ng+i +r++vC+k g+r ++ k ++++r++ra tr++Ck +++ ++++ Aradu.ULI7Q 87 EFYAKYVKCYEFVSRKDLKMV-DANGNINTRQLVCNKAGERYWRHLKrDNRQREHRAITRVNCKVRIRFIRHYR 159 6*********998886655.59999*********98887664789999**********99877664 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.8E-6	87	158	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence Send to blast
MDLILEFIDL GVMENDGKES YKDGDQSEDL SVEYECSSDE SDDMVDVTVD EAEADIINAG 60 GLKKLITDLT IEDIWGLAFD TESQVCEFYA KYVKCYEFVS RKDLKMVDAN GNINTRQLVC 120 NKAGERYWRH LKRDNRQREH RAITRVNCKV RIRFIRHYRT DYREISGELL KLISKVQNKG 180 DAQARLSPTS ALIGDPAVVK SKGAPRKTEE ISLSEETLKD KTNTSGIEAT EVPDAATTKI 240 PGLPQYPIHH YPVVLPYQPY GGVLPIPFHP VPNGMAYFDQ YPSTAGITSY PQMISLGALY 300 VTVRIHASVA VNIGGNNINL MLKVPLLTPD LVKPSFHCCK GKQVIG

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence Send to blast

MDLILEFIDL GVMENDGKES YKDGDQSEDL SVEYECSSDE SDDMVDVTVD EAEADIINAG  60
GLKKLITDLT IEDIWGLAFD TESQVCEFYA KYVKCYEFVS RKDLKMVDAN GNINTRQLVC  120
NKAGERYWRH LKRDNRQREH RAITRVNCKV RIRFIRHYRT DYREISGELL KLISKVQNKG  180
DAQARLSPTS ALIGDPAVVK SKGAPRKTEE ISLSEETLKD KTNTSGIEAT EVPDAATTKI  240
PGLPQYPIHH YPVVLPYQPY GGVLPIPFHP VPNGMAYFDQ YPSTAGITSY PQMISLGALY  300
VTVRIHASVA VNIGGNNINL MLKVPLLTPD LVKPSFHCCK GKQVIG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.ULI7Q

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A445A6K6	5e-90	A0A445A6K6_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15352	2	9

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	3e-07	FAR1 family protein