PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.UKN3W | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 399aa MW: 43328.2 Da PI: 6.8408 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.1 | 4.2e-05 | 27 | 46 | 2 | 21 |
HHHHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafe 21 r +h+ E+rRR++iN+++ Aradu.UKN3W 27 RSKHSVTEQRRRSKINERYV 46 899**************985 PP | |||||||
2 | HLH | 24 | 7e-08 | 115 | 149 | 17 | 55 |
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 N++f+ Lr+l+P++ ++K + a+ L +++eY+++Lq Aradu.UKN3W 115 NEGFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 149 99***********9....8*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 4.7E-5 | 26 | 46 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.127 | 98 | 148 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.8E-4 | 110 | 154 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.23E-7 | 115 | 153 | No hit | No description |
SuperFamily | SSF47459 | 4.45E-10 | 115 | 169 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.2E-5 | 115 | 149 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.1E-12 | 115 | 167 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence Send to blast |
TDLQLLCLVS GFVNADAKAV DKASVIRSKH SVTEQRRRSK INERYVQRAS VISSVLSASV 60 FDVGALNHDA FGRQAVNTVG IVICYEATSL HKHHHNSMVT DANHASSCSV LQARNEGFQI 120 LRDLIPHSDQ KRDTASFLLE VIEYVQYLQE KVQKYEGSYQ GWGHEPSKLM PWRNSHWRVQ 180 SFVGQPQAIK NGSGPVSPFP GKFDESNISI SPTMLSGNQN MIDTDQGRDI VSKASEGQTD 240 LASKGIALPL GMHPNMSIPV RSDGVLSHPL QGSVSEAQST ECPAASEPLS QQDELTIEGG 300 TISISSVYSQ GAVKNSNGYE YELLNNLTQA LQSAGLDLSQ ASISVQINLG KRANNGPSCG 360 TSSPKNHDMV PSSNQAFAQF RDAGSEDSDQ AQKRLKTFK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive brassinosteroid-signaling protein. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00219 | DAP | Transfer from AT1G69010 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.UKN3W |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025654934.1 | 0.0 | transcription factor BIM2 isoform X2 | ||||
Swissprot | Q9CAA4 | 1e-81 | BIM2_ARATH; Transcription factor BIM2 | ||||
TrEMBL | A0A445D509 | 0.0 | A0A445D509_ARAHY; Uncharacterized protein | ||||
STRING | XP_007153463.1 | 1e-165 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1730 | 33 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 7e-84 | BES1-interacting Myc-like protein 2 |
Publications ? help Back to Top | |||
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