PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.UA79E
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 465aa    MW: 51325 Da    PI: 6.6029
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.UA79EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.41.5e-12237290155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV++++++gr++A+++d    +  k+  + + g+ gt eeAa+a++ a+ k++g
  Aradu.UA79E 237 SQYRGVTRHRWTGRYEAHLWD----NtcKKeGQTRKGRQGTQEEAAEAYDVAAIKFRG 290
                  78****************999....33544699999*******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-8237290IPR001471AP2/ERF domain
SuperFamilySSF541716.34E-13237300IPR016177DNA-binding domain
CDDcd000183.02E-19237300No hitNo description
PROSITE profilePS5103216.832238298IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-12238298IPR001471AP2/ERF domain
SMARTSM003802.5E-23238304IPR001471AP2/ERF domain
PRINTSPR003675.7E-7239250IPR001471AP2/ERF domain
PRINTSPR003675.7E-7280300IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MKWINSDSNN HHAWLGFSLS PHHMKFDLPN SSSSSTTTTS SSSSCGGDHS AAFHSQLSVM  60
PLKSDGSLCI MEALTRSHQT QQVMVGSSSP KLEDFLGGAS MGTHEREAID TIYYPPHRGF  120
LSEPLRHPPY YSFACHGMYQ APPPTMPHIA EAEEEEEEGI DGFKKWVEQQ QQQQSLSLSM  180
SPGSESSCVT AAKHENGKSE SSVVAVTVME NSNKKRGLAN KQPVHRKSID TFGQRTSQYR  240
GVTRHRWTGR YEAHLWDNTC KKEGQTRKGR QGTQEEAAEA YDVAAIKFRG SNAVTNFDIS  300
RYDVERIMGS NTLLAGELAR RNNKDTAIDP PRWEAIEYNT NVEAVQARNN NNDNTNNNND  360
VDSNWKMVSG GAFSVGIHDL IGIEGQQPLM EASSLVTSLS SSREASPEKI MGPSSMMFPK  420
PLQLEPKMVL NNPLTSTGVV GSWFPSQMRP ASLSHLPVFA AWNDT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.UA79E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935185.10.0AP2-like ethylene-responsive transcription factor ANT
RefseqXP_025613482.10.0AP2-like ethylene-responsive transcription factor ANT
TrEMBLA0A445BUG40.0A0A445BUG4_ARAHY; Uncharacterized protein
STRINGXP_004501498.15e-90(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91634114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.17e-34AP2 family protein