PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.U974Q
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 633aa    MW: 71664 Da    PI: 6.8148
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.U974QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.59e-5661331128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                  lppGfrFhPtdeelv +yLk+k++g+k++l e+i+evd+yk+ePwdLp +  + +++ ewyfFs+rd+ky++g+r+nratk gyWkatgkd++v s +
  Aradu.U974Q   6 LPPGFRFHPTDEELVAYYLKRKINGRKIDL-EIIPEVDLYKCEPWDLPgRsLLPGKDLEWYFFSPRDRKYPNGSRTNRATKCGYWKATGKDRKVNS-Q 101
                  79****************************.99***************5334455777**************************************.9 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++vg+kktLv+y+grap+g++t Wvmheyrl
  Aradu.U974Q 102 SRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRL 133
                  99****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.06E-634158IPR003441NAC domain
PROSITE profilePS5100561.2236158IPR003441NAC domain
PfamPF023651.9E-307133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIDLEIIPE VDLYKCEPWD LPGRSLLPGK  60
DLEWYFFSPR DRKYPNGSRT NRATKCGYWK ATGKDRKVNS QSRAVGMKKT LVYYRGRAPH  120
GSRTGWVMHE YRLHERECET NAASGLQDAY ALCRVFKKAA VILPKVADHY AGNNIMMMTT  180
DSQGTPQVFD TMPWDHHIGH NGKCPHLSQD PFLNNLPSSS SSSFPHYGAL TYSPSKVDVA  240
LECARMQHSF SMPPLEVVEE FPNVGISELN IMTRGTTSMC GGSMNNNNES DILQQILSLA  300
NANVSSHEFT NQSNHSHTLL AGNNNANYSA PHHHEHDFAF NAGTSYTNHA VNDMNPMRYE  360
IQHQNLRTIE IGDLESEFKS FMEEQKTVPI EDISSFQTNI QENEVQESEL HNSNKEFSEA  420
DIDNFSMGFI NDGDPNENFI DEDDNIDYSN STSFEVLEET KVSHGMFVAT RRVADTFFHQ  480
IVPSQTIKVQ LNPVTIMGNN SSMEMLKNNQ ESLFKKLMMM KSPNTLASAI VFIFALLLTL  540
CVNLKGQVEN YWASRSDDDT INVKKKCCYG ANRSMKRMKQ VAHKIIWNQQ EKSWCVGIKS  600
GRGFSVVLKK IGIFLSISLA LCTMWVNHVT ISP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A3e-57116015170NAC domain-containing protein 19
3swm_B3e-57116015170NAC domain-containing protein 19
3swm_C3e-57116015170NAC domain-containing protein 19
3swm_D3e-57116015170NAC domain-containing protein 19
3swp_A3e-57116015170NAC domain-containing protein 19
3swp_B3e-57116015170NAC domain-containing protein 19
3swp_C3e-57116015170NAC domain-containing protein 19
3swp_D3e-57116015170NAC domain-containing protein 19
3ulx_A2e-57215811168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.U974Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150369e-42AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015956703.10.0NAC domain-containing protein 86-like isoform X2
TrEMBLA0A444ZVT10.0A0A444ZVT1_ARAHY; Uncharacterized protein
STRINGGLYMA11G33210.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44213460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-134NAC domain containing protein 28