PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.U6TUV

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 272aa MW: 30671.5 Da PI: 9.7001

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.U6TUV	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.5	2.4e-09	31	110	7	91
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 Ak + Fs+r+++++k+ + +k+++ s+ k +++ + +++t++ t +C a++ ++ k g+w +++++l+H+H+++p Aradu.U6TUV 31 AKAASFSTRVRSTNKK--GN-EIKNQLISSEREKWKSKISL---TEKTNPITGLNCPARIYIHTLKdVGVWIISNVVLHHSHPCCP 110 88999***998887..44.35666665555554444444...799***********998879*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	9.0E-7	31	110	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence Send to blast
LSRCCSGVDQ EFLGPLCIDD DQCCKILQGL AKAASFSTRV RSTNKKGNEI KNQLISSERE 60 KWKSKISLTE KTNPITGLNC PARIYIHTLK DVGVWIISNV VLHHSHPCCP TQAEMLKQHR 120 ELSISVRRTI ENNEEAAHKG ARACIHFLTS SLHGTARLSN LSNNTIIASE AGSKQRENQM 180 LQIFIQSYRV QQDLPLKLNF NMCTLTKRLA NCITRVTNST LGYSVYEVGE QVFSSQQVCG 240 YLRLSSSRSE MTMLIIRVKK HIMPSRLKCV KF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.U6TUV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-109	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020979233.1	1e-60	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445CUV2	4e-79	A0A445CUV2_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477