PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.TJ4B5
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 181aa    MW: 20346.9 Da    PI: 4.8859
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.TJ4B5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.12.3e-11191011098
                  HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  +l+ g+l lpkkf +++g   +++  + l+ ++g  W++    + ++g + +++GW+eF++   L+ g  + F +++  + +  v++f+
  Aradu.TJ4B5  19 SLEDGNLKLPKKFSKKYGDGVPNP--VYLKPPDGTAWKIDW--SLYDGVIQFENGWNEFASYYSLDNGHLLCFAYNE--TSNIEVQIFD 101
                  456677***********5554565..***************..99999999***********************966..4445888886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.103.7E-164101IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.96E-175101IPR015300DNA-binding pseudobarrel domain
CDDcd100174.27E-1010101No hitNo description
PROSITE profilePS5086310.8710103IPR003340B3 DNA binding domain
SMARTSM010191.8E-1011103IPR003340B3 DNA binding domain
PfamPF023621.7E-818101IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MASSISSDIR FFKIGLRKSL EDGNLKLPKK FSKKYGDGVP NPVYLKPPDG TAWKIDWSLY  60
DGVIQFENGW NEFASYYSLD NGHLLCFAYN ETSNIEVQIF DIIDGFEIKY PSLDHIGDDN  120
SIEILNELPP RGWPSIKLKA AAEVSSPSTS KILRSSVKTG DVEKGPDKQN WMQCCKNEEA  180
S
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.TJ4B5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015946761.11e-131B3 domain-containing protein At3g18960
TrEMBLA0A444X9W71e-102A0A444X9W7_ARAHY; Uncharacterized protein
TrEMBLA0A445B1P92e-99A0A445B1P9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.12e-16B3 family protein