PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.T2RRK
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 210aa    MW: 25097.5 Da    PI: 10.5087
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.T2RRKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.81.6e-12114206597
                  -..-HHHHTT-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
           B3   5 ltpsdvlksgrlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                  l +++  k +r+++p +fa+     gg+  ++ t ++e  + + ++e+ +   r+k ++y ++  Wk+Fvk ++ k++D++vF++++++++  +++vf
  Aradu.T2RRK 114 L-TKHDIKADRVYIPYQFANFLlevGGS--QNWTFIVEEsKINTRFEMHVLKsRGKEREYKIGPKWKDFVKMHKFKARDSCVFEMVSKEDR--LIRVF 206
                  4.677788899********666887555..44556655535568999999664666666*************************9987777..66665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019368.24E-12109207IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.8E-10110207IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.0063111209IPR003340B3 DNA binding domain
PfamPF023629.7E-11114205IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MVRICLMYVI NVIFFMAPMD KRSNLIYMDF NQSHYVKNII GISLLKVIQD KLWLNYFDRS  60
DDVASRIEDN GMHENLKRPQ IQKIVKKNSE ASAVQNRSKK KKRGYLILHH CKRLTKHDIK  120
ADRVYIPYQF ANFLLEVGGS QNWTFIVEES KINTRFEMHV LKSRGKEREY KIGPKWKDFV  180
KMHKFKARDS CVFEMVSKED RLIRVFVTKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.T2RRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020995282.11e-155uncharacterized protein LOC110279727
TrEMBLA0A444Y3052e-69A0A444Y305_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3018522