PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.T2RRK | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | B3 | ||||||||
Protein Properties | Length: 210aa MW: 25097.5 Da PI: 10.5087 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.8 | 1.6e-12 | 114 | 206 | 5 | 97 |
-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 5 ltpsdvlksgrlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 l +++ k +r+++p +fa+ gg+ ++ t ++e + + ++e+ + r+k ++y ++ Wk+Fvk ++ k++D++vF++++++++ +++vf Aradu.T2RRK 114 L-TKHDIKADRVYIPYQFANFLlevGGS--QNWTFIVEEsKINTRFEMHVLKsRGKEREYKIGPKWKDFVKMHKFKARDSCVFEMVSKEDR--LIRVF 206 4.677788899********666887555..44556655535568999999664666666*************************9987777..66665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 8.24E-12 | 109 | 207 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 3.8E-10 | 110 | 207 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 0.0063 | 111 | 209 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 9.7E-11 | 114 | 205 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
MVRICLMYVI NVIFFMAPMD KRSNLIYMDF NQSHYVKNII GISLLKVIQD KLWLNYFDRS 60 DDVASRIEDN GMHENLKRPQ IQKIVKKNSE ASAVQNRSKK KKRGYLILHH CKRLTKHDIK 120 ADRVYIPYQF ANFLLEVGGS QNWTFIVEES KINTRFEMHV LKSRGKEREY KIGPKWKDFV 180 KMHKFKARDS CVFEMVSKED RLIRVFVTKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.T2RRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020995282.1 | 1e-155 | uncharacterized protein LOC110279727 | ||||
TrEMBL | A0A444Y305 | 2e-69 | A0A444Y305_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF30185 | 2 | 2 |