PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.S9TS8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 334aa MW: 37069 Da PI: 4.9294 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.6 | 2.2e-32 | 151 | 207 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers+edp++++itYeg H h Aradu.S9TS8 151 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLH 207 8******************************************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 27.278 | 145 | 210 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.1E-29 | 148 | 207 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.15E-26 | 148 | 207 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.1E-35 | 150 | 209 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.1E-26 | 151 | 207 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence Send to blast |
MVESTTNALM TMMMEEEVIL MSSNSNSNSN SSCSEGSEDD DLVKELLDDA TPLLLPPSDH 60 YNTIIRPPPS DGDGDDYDHA INSFISNIYS GPTISNFENA LSVINNSNNH QSDQHLEHLS 120 SARVSILERG LSKIENKYTL KFKCFGNGMG DDGYKWRKYG QKSIKNSPNP RSYYRCTNPR 180 CSAKKQVERS NEDPDTLIIT YEGLHLHFAY PHFLTGQPHQ SQSDPPIKKP KPMPTASPEN 240 KAQEILEAKD VQANPTLGLI QTTLTDSQED MANVNLGSQG LLEDMVPFMV RNPHNNGNST 300 NSLFSCSSQP TTPPSLWFPN YSTSCHTVGL NFSN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-20 | 151 | 207 | 15 | 71 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.S9TS8 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015037 | 2e-47 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015960810.1 | 0.0 | probable WRKY transcription factor 49 | ||||
TrEMBL | A0A445DG77 | 0.0 | A0A445DG77_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA07G16040.2 | 1e-139 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7118 | 34 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 4e-46 | WRKY DNA-binding protein 49 |