PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.R0ZPK
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 200aa    MW: 22828.6 Da    PI: 5.1172
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.R0ZPKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.23.2e-14901523191
         FAR1  31 rtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +++vC+keg r+ +  + ++++r+ r+ trt+C a+l+vk+++  ++w+v+ +++ HnH+l+p
  Aradu.R0ZPK  90 EQLVCNKEGWRNMRYLDmDDRSREARSLTRTKCPARLRVKLDYgCSRWKVSCFVESHNHDLTP 152
                  689*********9998867889999******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.8E-1290152IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
CVGLGKGHLP PTPTVYFLSV EAQPLVVINE HDVKNDSDND LGDDFDYQPT AEDNADDDDV  60
DSLDSTNKSE EVCGVKRIAE LIVEDIWNLE QLVCNKEGWR NMRYLDMDDR SREARSLTRT  120
KCPARLRVKL DYGCSRWKVS CFVESHNHDL TPPQFAHLVP ANRRLTVTDR VQVENLHNFG  180
VKSCHIMGFR FNAYGSMRTV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.R0ZPK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371771e-135HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015953982.11e-101protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_015965951.11e-100protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025702929.13e-97protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445D7E11e-96A0A445D7E1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-16FAR1-related sequence 5