PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.R0WSE

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

BES1

Protein Properties

Length: 650aa MW: 72763.5 Da PI: 6.7345

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.R0WSE	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	143.3	2.1e-44	26	165	1	134
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl..eeaeaagssasaspess 93 g+++r ++ +E+E++k+RERrRRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ +g++p+ ++a ++ ss s+ ++ Aradu.R0WSE 26 GSARRCRPLEEKERTKLRERRRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPprsQGQRPTggNSAVVTPSSPVPSQPTP 123 578999*************************************************************98889999997555555555556666565 PP DUF822 94 lq.sslkssalaspvesysaspksssfpspssldsislasaa 134 + + ++s +s +e +++k + +p ps +d s++ ++ Aradu.R0WSE 124 SAsIRGVASGYRSSLEYNTCQTKGVFMPTPSPYDLSSSSRSQ 165 55477889999*********************98776543 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.8E-39	28	163	IPR008540	BES1/BZR1 plant transcription factor, N-terminal
SuperFamily	SSF51445	1.23E-179	209	646	IPR017853	Glycoside hydrolase superfamily
Gene3D	G3DSA:3.20.20.80	7.0E-195	210	644	IPR013781	Glycoside hydrolase, catalytic domain
Pfam	PF01373	5.1E-102	216	636	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.6E-67	247	261	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.6E-67	268	286	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.6E-67	290	311	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.6E-67	383	405	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.6E-67	456	475	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.6E-67	490	506	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.6E-67	507	518	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.6E-67	525	548	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.6E-67	565	587	IPR001554	Glycoside hydrolase, family 14

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000272	Biological Process	polysaccharide catabolic process
GO:0048831	Biological Process	regulation of shoot system development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0016161	Molecular Function	beta-amylase activity

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence Send to blast
MEVTAGGDNS FQQQQQFQEQ VGTPGGSARR CRPLEEKERT KLRERRRRAI TAKILAGLRR 60 HGNYNLRVRA DINDVIAALA REAGWVVLPD GTTFPPRSQG QRPTGGNSAV VTPSSPVPSQ 120 PTPSASIRGV ASGYRSSLEY NTCQTKGVFM PTPSPYDLSS SSRSQTSMVG DGELQRDNQP 180 LVGSGSMDTV HEKQIIDLPC RLSERDLAGT PYVPVYVMLP LGVINIKCEL VDPDGLLKQL 240 KVLKSINVDG VTVNCWWGIV EAHAPQEYNW NGYKRLFQMV HELKLKLQVV MSFHECGGNF 300 GDDVCIPLPH WVAEIGRTNP DIFFTDREGR HNPECLSWGV DKERVLRGRT ALEVYFDFMR 360 SFRVEFDEYF EDSFISMIEV GLGPCGELRY PSCPVKHGWR YPGVGEFQCY DQYMLKSLKK 420 AAEARGHSIW VRGPDNAGTY NSQPHETGFF CDGGDYDGFY GRFFLNWYSK VLVDHGNGVL 480 SLAKLAFEGS CIAAKLANIY WWYKTASHAA ELTAGYYNPC NRDGYAAIME MLKSNGVSLN 540 IACADLNTLN QLEVFPKAFA DPEGLVWQVL NAGWDLGLPV AGENALPCLN RVTYNKALDS 600 AKPMNDPDGR HFSSFTYLRL SPLLMEQQNL REFERFIKRM HGEAVLDLQV

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence Send to blast

MEVTAGGDNS FQQQQQFQEQ VGTPGGSARR CRPLEEKERT KLRERRRRAI TAKILAGLRR  60
HGNYNLRVRA DINDVIAALA REAGWVVLPD GTTFPPRSQG QRPTGGNSAV VTPSSPVPSQ  120
PTPSASIRGV ASGYRSSLEY NTCQTKGVFM PTPSPYDLSS SSRSQTSMVG DGELQRDNQP  180
LVGSGSMDTV HEKQIIDLPC RLSERDLAGT PYVPVYVMLP LGVINIKCEL VDPDGLLKQL  240
KVLKSINVDG VTVNCWWGIV EAHAPQEYNW NGYKRLFQMV HELKLKLQVV MSFHECGGNF  300
GDDVCIPLPH WVAEIGRTNP DIFFTDREGR HNPECLSWGV DKERVLRGRT ALEVYFDFMR  360
SFRVEFDEYF EDSFISMIEV GLGPCGELRY PSCPVKHGWR YPGVGEFQCY DQYMLKSLKK  420
AAEARGHSIW VRGPDNAGTY NSQPHETGFF CDGGDYDGFY GRFFLNWYSK VLVDHGNGVL  480
SLAKLAFEGS CIAAKLANIY WWYKTASHAA ELTAGYYNPC NRDGYAAIME MLKSNGVSLN  540
IACADLNTLN QLEVFPKAFA DPEGLVWQVL NAGWDLGLPV AGENALPCLN RVTYNKALDS  600
AKPMNDPDGR HFSSFTYLRL SPLLMEQQNL REFERFIKRM HGEAVLDLQV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1q6d_A	1e-143	212	643	11	444	beta-amylase
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.R0WSE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015037	3e-85	AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015961716.1	0.0	beta-amylase 7 isoform X4
Swissprot	O80831	0.0	BAM7_ARATH; Beta-amylase 7
TrEMBL	A0A445DD86	0.0	A0A445DD86_ARAHY; Beta-amylase
STRING	XP_007139874.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF10883	33	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	beta-amylase 7

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]