PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.QTB5P
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 437aa    MW: 51057.5 Da    PI: 10.1786
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.QTB5PgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.64e-1212881798
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                  lp +f+e++g+    s  l l+ ++  +W+v    ++++g+++++kGWkeFv    L+ g  + F+++ r + + +v++f+
  Aradu.QTB5P 12 KLPITFTEKYGSA--LSNPLYLNPPDDTEWRVDW--TNHDGEILFKKGWKEFVAYYSLDHGHLLWFEYNTR-TSHIKVHIFD 88
                 599*******866..7778***************..*******************************9875.4446999887 PP
2B335.32.1e-113904355399
                  EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3  53 rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  + +s+ +++++GW++F++a +L++gD++vF+l+++++  + v+++r+
  Aradu.QTB5P 390 QPSSKNTFISAGWNSFARASKLEAGDVCVFELVNEKDL-FDVHICRT 435
                  6788899*************************997444.69999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.18190IPR003340B3 DNA binding domain
SMARTSM010190.022790IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.1E-141190IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.53E-141297IPR015300DNA-binding pseudobarrel domain
PfamPF023625.5E-91288IPR003340B3 DNA binding domain
CDDcd100173.34E-81388No hitNo description
CDDcd100174.44E-10332434No hitNo description
SMARTSM010190.025333436IPR003340B3 DNA binding domain
SuperFamilySSF1019365.89E-11350435IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.812389436IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.107.7E-10389436IPR015300DNA-binding pseudobarrel domain
PfamPF023625.6E-9390435IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MVANTRFITL QKLPITFTEK YGSALSNPLY LNPPDDTEWR VDWTNHDGEI LFKKGWKEFV  60
AYYSLDHGHL LWFEYNTRTS HIKVHIFDMR CLQIEYPAND QIKEQLPRRG QQQPVKRPEE  120
PKTRDVDSSP NTQNMRLNQG WQKKRLYEPL PRDGQLRKKL RALVSSASKG RQLENDTQIR  180
DLERSLSLHD IKSKEKNHEM SVSVNQDSNG KRNREKDSLS SVRPYPTRPE SLKEAKKFKW  240
EKPSFIIKIT QRSQSRAPCY FPTKFFRKYF ENNPQNANIR FGKKLFPAKL ICRPSSCDAF  300
ISAAGDVCLF KLINRKDPVL DVHICRRQRC ESLFKPVTHG IQLFKEVKEL NSQNPSFIVK  360
IRDSDPKRSR PVRCKVTIRK EVVACYDNLQ PSSKNTFISA GWNSFARASK LEAGDVCVFE  420
LVNEKDLFDV HICRTQC
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.QTB5P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182534.10.0B3 domain-containing protein LOC_Os12g40080-like
RefseqXP_025681366.10.0B3 domain-containing protein LOC_Os12g40080
TrEMBLA0A444XAP50.0A0A444XAP5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-11B3 family protein