PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.QG0BG
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CAMTA
Protein Properties Length: 328aa    MW: 37072.4 Da    PI: 6.8292
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.QG0BGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1138.22.5e-4358735117
         CG-1  35 ksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117
                  + gsl+Ly+rk +ryfrkDG+ w+kkkdgkt rE+hekLK g+v+vl+cyYah+e+n++fqrr+yw+L+e+le+ivlvhy++ 
  Aradu.QG0BG   5 QAGSLFLYDRKTLRYFRKDGHRWRKKKDGKTFREAHEKLKAGNVDVLNCYYAHGEDNENFQRRSYWMLDEQLEHIVLVHYRHI 87 
                  78******************************************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143762.629193IPR005559CG-1 DNA-binding domain
SMARTSM010762.9E-42188IPR005559CG-1 DNA-binding domain
PfamPF038593.2E-37586IPR005559CG-1 DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MWTRQAGSLF LYDRKTLRYF RKDGHRWRKK KDGKTFREAH EKLKAGNVDV LNCYYAHGED  60
NENFQRRSYW MLDEQLEHIV LVHYRHIKEG YKSGVSHSPA APVSLVGSSR TSSAPSSVKI  120
ESPISVFQTS VSSTANEVEQ AGRASVCDDR HSENGPQVLS HARPIDTSIP HNARLLGHEA  180
TGFAELMRDP LISWSSSLPS FYPGSGLSSC ATIENTSRTT VDMNDGELHV EADPINQHVQ  240
NFRDRLMTDV CIQPVTGMLH AVNQVQKEHD LVSLRTQFHH HHPVLATKNV VEQKFQDGGL  300
DNDDPQNVES GELKKLDCFG WWMDKEIG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.QG0BG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020986075.10.0uncharacterized protein LOC107466080
RefseqXP_020986076.10.0uncharacterized protein LOC107466080
RefseqXP_020986077.10.0uncharacterized protein LOC107466080
RefseqXP_029144946.10.0uncharacterized protein LOC114924474
RefseqXP_029144947.10.0uncharacterized protein LOC114924474
RefseqXP_029144948.10.0uncharacterized protein LOC114924474
RefseqXP_029144949.10.0uncharacterized protein LOC114924474
RefseqXP_029144950.10.0uncharacterized protein LOC114924474
TrEMBLA0A445BIJ71e-167A0A445BIJ7_ARAHY; Uncharacterized protein
STRINGGLYMA17G04310.21e-138(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF142411819
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.28e-43Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains