PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.Q51PJ | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 465aa MW: 49804.5 Da PI: 7.4629 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.6 | 7.9e-31 | 218 | 276 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg++ pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+ Aradu.Q51PJ 218 SDGCQWRKYGQKMAKGNPSPRAYYRCTMAaGCPVRKQVQRCAEDSTVLITTYEGNHNHP 276 7***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.6E-33 | 202 | 278 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.28E-27 | 210 | 278 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.71 | 212 | 278 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.0E-37 | 217 | 277 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.9E-27 | 219 | 276 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 465 aa Download sequence Send to blast |
MQTGLNLTCE TTGISTSKGS PNADNTESER KMVEGELRRL QEENRKLRSM VDQIAKSYSQ 60 LQAQLFMALQ KQKLTHHHQN TGVKSNGMIS GEKAVEGDGR AKVEMKNNDA SVSGDEKRER 120 EVSASNNNGN NAEEVMSKKH DENDDDNEGD EDGLTKLHLG KQVAASATEE DVLERSSSQS 180 WGSCKTPNLE EPKLPSSDLP FRKARVSVRA RSEAPLISDG CQWRKYGQKM AKGNPSPRAY 240 YRCTMAAGCP VRKQVQRCAE DSTVLITTYE GNHNHPLPPA ATAMANTTSA AAAMLLSGST 300 SSSSKETLAT SAAGGYFSSS MPYTSMATLS ASAPFPTITL DLTHNHHNAL QLHRVVPPPG 360 VTFPLPLHAV TPPHQLIAGH PFLISHHQKL MPPLVHRQQP QASNNSPSMV ETVSAAIALD 420 PNFTAAVAAA LSSIIGSSNN GGSAISVSPN GSPQLPQSCT TYSTN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 4e-23 | 208 | 278 | 8 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 4e-23 | 208 | 278 | 8 | 77 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.Q51PJ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015968808.1 | 0.0 | probable WRKY transcription factor 47 isoform X1 | ||||
Refseq | XP_015968810.1 | 0.0 | probable WRKY transcription factor 47 isoform X3 | ||||
TrEMBL | A0A445CMY3 | 0.0 | A0A445CMY3_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA19G40950.2 | 1e-167 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10439 | 25 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01720.1 | 9e-65 | WRKY family protein |