PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.P6A1G
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TALE
Protein Properties Length: 754aa    MW: 82929.2 Da    PI: 8.0139
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.P6A1GgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.62.4e-095125491954
                  HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  Fe   ++yp+ +++  LAk++gL+ +qV++WF N R +
  Aradu.P6A1G 512 FEHflHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVR 549
                  554459******************************88 PP
2BELL100.31.5e-32386452672
         BELL   6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                   +kk++Ll++l+eV++rY+qy++q+++v+ sFe v gl +a+pY+slA k++S+hFrcLk+ai++q+
  Aradu.P6A1G 386 SRKKSRLLTMLDEVYRRYRQYYQQMHAVVTSFEYVSGLTNAAPYASLAIKTMSKHFRCLKNAITDQL 452
                  579*************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005743.1E-40303450IPR006563POX domain
PfamPF075264.3E-38308449IPR006563POX domain
PROSITE profilePS5007112.098490553IPR001356Homeobox domain
CDDcd000862.25E-12493554No hitNo description
SMARTSM003893.4E-10493557IPR001356Homeobox domain
SuperFamilySSF466896.84E-17495560IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-27496557IPR009057Homeodomain-like
PfamPF059201.4E-18510549IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010089Biological Processxylem development
GO:0010154Biological Processfruit development
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048457Biological Processfloral whorl morphogenesis
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 754 aa     Download sequence    Send to blast
MAEEGFEGYH VPQQSRRDKL RVVVAHNQQH HHQQTTTLLE SSSTPPPTTT TTSTSWYDPS  60
SFIPSDLLTC AAATQQGHHG NFHLNNEPSK PNNTTNLFAS SSAVKQEEQQ RSGLMMMGFG  120
VVTAINNASS SSSSSPSSNS SSVSLSHHHA YMDPQSSSTL HLNNPSIHVF GNNNNNNNPL  180
FLYQPQNLRD FDNHGGYGGG GGGGSGGGGE IMVFKPEPLS LSLSSHNHNH GSNNNNHNSN  240
NNGNNLPLEL NLQRYGAMIC GGGGGVIPGL VVNSSGGGSG TSNEVSRSCS SVMVVPQMMG  300
PFTGYASVLK GSRFLKPAQQ LLEELCDVGV GVVGAEDKII VADASLMEPP PTAASTTTPL  360
MECLNHSHHE DPLLLADQHA AAAVESRKKS RLLTMLDEVY RRYRQYYQQM HAVVTSFEYV  420
SGLTNAAPYA SLAIKTMSKH FRCLKNAITD QLQFNNKTHF QLSNRKDESP RFGNNDRGPY  480
GQRSGFIEHQ PVWRPQRGLP ERAVTVLRAW LFEHFLHPYP TDTDKLMLAK QTGLSRSQVS  540
NWFINARVRL WKPMVEEIHM LETRQAQKNT QREEHSRNKS SDPLPSDNTT LVSDNPSTSA  600
ADKFQEAPYK RAMNELPSMA IRTQEQVNLA CHGNQQVGIG VSMGSASNNV SLTLGLHQNH  660
GIGLAEPFPL SAAQRFGLGL ETNNEGYVLS GFESQNRHFG RDVIGGQLLH DFVGRRRRRS  720
SIFNSFAWTF QFDWGDKNTN HVSVVLFHEP SRRK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A1e-15499557563Homeobox protein Meis2
3k2a_B1e-15499557563Homeobox protein Meis2
4xrs_A9e-16499556158Homeobox protein Meis1
4xrs_B9e-16499556158Homeobox protein Meis1
5bng_A1e-15499557159Homeobox protein Meis2
5bng_B1e-15499557159Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.P6A1G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015950152.10.0BEL1-like homeodomain protein 9
TrEMBLA0A445EBH10.0A0A445EBH1_ARAHY; Uncharacterized protein
STRINGGLYMA01G25710.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28103373
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.11e-104TALE family protein